Acetobacter pomorum: CPF11_11830
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Entry
CPF11_11830 CDS
T05180
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
apom
Acetobacter pomorum
Brite
KEGG Orthology (KO) [BR:
apom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apom03032
]
CPF11_11830
03036 Chromosome and associated proteins [BR:
apom03036
]
CPF11_11830
03400 DNA repair and recombination proteins [BR:
apom03400
]
CPF11_11830
DNA replication proteins [BR:
apom03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CPF11_11830
Chromosome and associated proteins [BR:
apom03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CPF11_11830
DNA repair and recombination proteins [BR:
apom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CPF11_11830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
WVELL
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ATI13058
UniProt:
A0AAN1PGZ5
LinkDB
All DBs
Position
complement(2505080..2505394)
Genome browser
AA seq
104 aa
AA seq
DB search
MTRSELITALMQKNPHLQLKEATRLVNIVFGTITSSLAEGSRVELRGFGAFSVKERDPRV
GRNPKTGVQVQVGKKLVPFFKTGKELHQRLNKPVSGSKRSRSSV
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgaccagatccgagctgattacagccctgatgcaaaaaaatccgcatcttcagctgaaa
gaagcaacacgacttgtaaatattgtatttggcaccattaccagcagccttgcggaaggc
agccgcgtagaattacgtgggtttggtgcattttctgtaaaagagcgtgacccacgcgtt
ggccgcaacccaaaaacaggggtgcaggttcaggttggcaaaaagctcgttcccttcttt
aaaacgggcaaagagctacaccagcgcctgaacaagcctgttagtggtagcaagcgctca
cgctcctcagtctga
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integrated database retrieval system
