Acetobacter pomorum: CPF11_12020
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Entry
CPF11_12020 CDS
T05180
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
apom
Acetobacter pomorum
Brite
KEGG Orthology (KO) [BR:
apom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apom03009
]
CPF11_12020
Enzymes [BR:
apom01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CPF11_12020
Ribosome biogenesis [BR:
apom03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CPF11_12020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Motif
Other DBs
NCBI-ProteinID:
ATI13093
LinkDB
All DBs
Position
complement(2550410..2551708)
Genome browser
AA seq
432 aa
AA seq
DB search
MTETYDTDVLYLATQGDGAVRTPDGSVVYVPETLAGEHVRLNKNSDGKWQLVEVLQPSPD
RQIAPCSLFERCGGCTLQHVKPAAILQWKMATVQHALQKAGFNNLPAFSAEQVQPYSRRR
ADLAVRRQPDSIIIGLHARNSHAVTDLTTCVVLHPDILAALPAFRATLRSLNAIRREANL
HINLLDSGLDVLLQTDGPLTAPDRVRLAQLATEQRIPRISWQLIKDTGQPEVAAQSGSVV
QTIASHQITPPPGTFLQATDESEKYIQDAVVKSLPAKLNRRDIITELYAGCGTLTFPLAE
HARVNAYEGYAPALEALKKATSGTRISTFCRDLNHQPVLAKEIAASAVVVLDPPHAGAKL
QMRQIAQGLPTHIIYVSCNPAALAQDASLLAKAGYTVENVTVVDQFLWSAEIEAICSFKR
ESSRRSRNGLSR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaaacttacgatacggatgttctctatctggcaacgcagggcgatggtgccgtg
cgtacgccagatggttctgtagtttacgttccggaaactcttgctggtgagcatgtgcgt
ctgaataaaaattcagatggcaagtggcagcttgttgaagttcttcaaccttcaccagat
cggcagatagcgccctgctccttgtttgaacgctgcggtggttgcacgctccaacatgta
aaacctgctgctattttgcagtggaaaatggctactgttcaacacgctttacaaaaggct
gggtttaacaaccttccggcattttctgccgagcaggtgcagccatactctcgccgtaga
gcagatctggcagtaaggcgtcagcctgatagcatcatcattgggcttcatgcgcgcaat
agccacgccgttacagaccttaccacctgcgttgtgttgcaccccgacattctagcggcc
ctacccgcttttcgggccacactccgcagcttgaacgccattcggcgtgaagccaattta
catatcaatctgctggattctgggctggatgttctgttgcaaacagatgggccgctaact
gcaccagaccgcgtgcgtttggcgcaactggctacagagcagcgcattccgcgtatcagt
tggcagttgattaaagatacaggtcagccagaagtcgcggcacaatcaggctctgttgtt
cagacaattgcttctcaccaaattacaccgccacctggcacttttttgcaggcaacggat
gaaagtgagaaatatattcaggatgccgttgtaaaaagcctgcccgccaagctgaaccgc
cgtgatattattaccgagctttatgccggttgtggcacacttacgtttccattggcagaa
catgcccgcgtaaacgcttacgaaggctacgcacccgctttagaagccctgaagaaagcg
acaagcggcacacgaatcagcacattctgtcgggatctaaaccatcagccagttttggct
aaggaaatagcagcttccgctgtggttgtactggaccccccgcacgcaggtgcaaagttg
caaatgcgccagattgcgcaagggttacccacccacattatttatgtaagctgtaacccc
gccgccttggcgcaggatgcaagcctgctggccaaagctggatatacggtggaaaatgta
actgtagttgaccagtttttatggtctgcagaaattgaagccatttgtagcttcaaacgt
gaaagctctcgccgcagccgcaacggcctttctcgttag
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