Acetobacter pomorum: CPF11_13135
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Entry
CPF11_13135 CDS
T05180
Name
(GenBank) methylase/helicase
KO
K26273
protein strawberry notch
Organism
apom
Acetobacter pomorum
Brite
KEGG Orthology (KO) [BR:
apom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
apom03036
]
CPF11_13135
Chromosome and associated proteins [BR:
apom03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
CPF11_13135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
HisG
DEAD
MTS
Motif
Other DBs
NCBI-ProteinID:
ATI13262
LinkDB
All DBs
Position
2798788..2803092
Genome browser
AA seq
1434 aa
AA seq
DB search
MDCPVTPTPDLRGFAAAGLLLSHLDRGETLDASRLRHAMETAFNAADATGAWDWKMAYDA
AEAASVLFLRRYGPALIARASGDTELLTSIARLASLLPSQTRRSDDSQTWQQFSTPLPLA
FCLARAADIGRGNHVLEPSAGTGLLAVFAELAGAVLTLNEYAPGRSDLLAALFLTARFFR
CDAAQIHDYLPESVQPDVVIMNPPFSATVHVAGRAPDTTFRHIASVLDRLKTGGRLVALT
GASFCPDNPRWTDGFTTLQAKARLAFSAGVAGHLYRQHGTGVETRVLVFDRIPASEPSHF
VAARGTAPDFPTLLGWITGDLPSRQPQAHQSSAVSRSAALSSPRTVRGYLGRKAAVASRQ
RTVSEMQGAFLSYEILPPDGGGTATTRLSDALYEDYRLQTIAIPGARPHPTKLVQSAAMA
SVRPPGPSHKPTLPDAVIRDGLLSDAQLESVIYAGEAHDRYLAGRWKADQTWDVLARVGE
DDPDGVRFRRGWFLGDGTGTGKGRQVAGIILDNWLNGRRRAVWVSKSDKLLEDAQRDWSA
LGMERLLVTPQSRFPQGNAIRLTEGILFTTYATLRTEERGAKASRVQQIVEWLGTDFDGV
IIFDEAHSMQNAAGGKGERGDQEASLQGRAGLRLQHALPDARVVYVSATGATSVHNLAYA
QRLGLWGGEDFPFVTRADFIAAIEAGGVAAMEVLARDLKAMGLYAARSLSYDGVEYELVE
HQLTPEQIRIYDAFARAFMVIHNNLDAAMQAANITGTDGTLNRQAKAAARSAFESTKQRF
FNHLITAMKTVTLIRSIERDLAEGHAAVIQLVSTGEALTERRLAEISPEDWNDLRIDVTP
REYVLGYLEHSFPVQLYEPYSDGSDHVYSRPVFHDGKPVLSREAVARRDAMIEQLAALPA
LPGALDQIIQHFGTDSVAEVTGRSRRVVRKGDRLAVESRPAAASLIETQAFMDDAKRILV
FSDAGGTGRSYHAELSAANRRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPIAT
DVKAEKRFLSTIARRLDTLGAMTRGQRQTGGQGLFRPEDNLESPYARDALRQFYRLLARE
KVEGCTLTDFEAATGLSLVDDNGLKDKLPPISTFLNRMLALPVALQNLLFATFEDLLAGR
VEAARTAGVYDAGLETLRADSFTILARQIIHTHAETGADTELLTIRERRRSEPVTLPQAR
GLGRERESGYVQNTQSGRVAVRIPAPGLVTEEGEYERRIRLVRPIETQLHSVDAFSASHW
KPIDQETFVPLWEAELRTVDEFVVTEFHMVTGLLLPVWKRLPTDHARVYRLQTDDGERVL
GRRVPVAWATSAGAAGSLSLSGQDARAALLDGGTVLHLAERMQVRRVRVMGRQRIELTGF
TEGMRERLRAYGLFSEIISWSLRFFVPVDERGDKVLERLFETWPIERLTEREAA
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggactgccctgtcacacccacgcccgacctgcggggttttgccgccgcggggttgctt
ttgtcccacctcgatcgcggggagacgctcgacgccagccgactgcgtcacgccatggaa
accgccttcaacgcggctgacgcaacgggcgcatgggactggaagatggcctatgacgcc
gccgaggccgcgtccgtgctgttcctgcgccgctatggaccggcactgattgcgcgcgcc
tcgggcgacacggaactcctcaccagcatcgcgcgtctggcgtcccttctcccctcgcag
acgcgccgctcggacgacagccagacctggcaacagttctcgacaccattaccgttggcg
ttctgccttgctcgtgcggcggatatcgggcgcggcaatcatgtgctggagccctcggca
gggaccggtcttctggccgtcttcgccgaactggcgggcgcggtcctgaccctcaatgaa
tacgcaccgggccgttccgacctgctggcagccctgttcctcacggcccggtttttccgg
tgtgacgctgcccagatccacgattatctgcccgagagcgttcagccggatgtcgtcatc
atgaacccgcccttttcagcgacggtccatgtggcggggcgggcgcctgacacgacgttc
cggcatatcgcctccgtacttgaccgactgaagaccggtgggcggcttgtcgccctgacc
ggtgcgtccttctgccccgacaacccgcgatggaccgatggcttcaccactctgcaggcc
aaggcacgtctggcgttttcggccggtgtcgcggggcatctctaccggcaacatggaacg
ggtgtagaaacgcgtgttctggtgttcgaccgcatacctgcttccgagccctcgcatttt
gtcgcggcccgcggcacggctcccgattttccgacgctgctgggctggatcaccggtgat
ctgccgtcccgtcagccacaggcgcaccagtcgtcggcagtgtcacgctctgctgctctc
tcctcgcctcgcaccgtgcggggctatctcgggcgcaaggcagccgtcgcatcccgccaa
aggacggtctcggagatgcagggtgcgttcctgtcctacgagatcctgccgccggacgga
ggcggaaccgcgacgacacgtctgtctgacgcgctctatgaggattatcgcctccagacc
atcgcaattcccggtgcgcggccacaccccaccaaactggtccagtcagccgccatggcc
tcggtgcgcccgcccgggccttcccacaagccaaccctccctgatgccgtcatccgtgac
ggcctgctctctgacgcgcagctggaatccgtcatctacgccggtgaggcccatgatcgc
tatctggcaggccgatggaaagccgatcagacatgggatgttctcgcccgtgtcggtgag
gatgaccccgatggtgtccgtttccgtcgcggttggttccttggcgacggcaccggcacc
ggaaagggccgccaggtcgcgggtatcattctcgacaactggctcaacggccgcaggcgc
gctgtctgggtgtcgaagtccgacaagcttctcgaagacgcgcaacgcgactggtcggcg
ctcggcatggagcggctgctggtcacgccccagtcacgctttccgcagggtaacgccatc
cgtctgaccgagggtatcctgttcacgacctatgcaacacttcgcacggaagagcgtggc
gcgaaagcctcccgcgtccagcagatcgtcgagtggctggggactgatttcgacggggtc
atcatcttcgatgaagcgcattccatgcagaacgccgccggcggtaagggagagcggggc
gatcaggaagcctccttacaggggcgtgccgggttacgcctgcaacatgctctgccggac
gcgcgggtggtctatgtctccgccacgggtgctacgtcggtccacaatctggcctatgcc
cagcgtctgggtctctggggcggggaggattttcccttcgtgacgcgggccgatttcatc
gccgccatcgaggcaggcggtgtggcggccatggaggtgctggcgcgcgatctcaaggcc
atgggactctatgccgcccggtcgctctcctacgatggcgtggaatatgaactggtcgag
catcaactcacgccggagcagatccgcatttatgatgctttcgcacgcgcgttcatggtc
attcataacaatctcgacgccgccatgcaggccgccaatattaccggcacggacggtacg
ctgaatcgtcaggccaaggcggcagcacggtcggccttcgaaagcaccaagcaacggttt
ttcaaccatctgatcacggccatgaagaccgtgaccctgatccgctcgatcgagcgcgat
ctggccgagggccatgctgccgtcatccagcttgtctccacaggcgaagccctgaccgaa
cgcaggctggcggagatctcgccggaagactggaatgatctgcggatcgacgtgaccccg
cgggagtatgtccttgggtatctggaacattccttcccggttcagctttatgagccctat
agcgatgggtctgaccatgtgtattcgcggccagtgtttcatgacggcaagcctgtcctg
agccgcgaggccgtggcccggcgtgatgcgatgatcgaacagcttgccgcactcccggca
ctgcccggcgcactcgaccagatcatccagcattttggcacggactctgtcgccgaggtg
actggccgctcgcgccgcgtggtgcgcaagggggaccggcttgccgtggaaagcaggcca
gcagcggccagcctgatcgagacacaggcattcatggatgatgccaagcgcattctggtc
ttctcggatgcaggaggtacgggccggtcctatcatgccgaactttcggctgcgaaccgc
cgtctgcgcgtacactatctgctggagcccggctggaaggccgatgctgccattcagggc
ctggggcgtaccaaccggaccaaccaggcgcagccgcccctgttccgaccgatcgccacg
gacgtgaaggcggaaaagcgttttctttccaccattgcccggaggctggacacgcttggc
gccatgacccgagggcagcgtcagacgggcgggcaggggttgttccggccggaagacaat
cttgaaagtccctatgcccgggatgcgttgcggcagttctaccgtcttcttgcccgtgaa
aaggttgaaggctgcacgctgacggacttcgaggcggcgacgggtctttcgctcgtggat
gacaatgggctgaaggataaacttccgccgatttccaccttcctgaacaggatgctggct
ctgccggtagcgttgcagaatctgctgttcgccacctttgaggatttattggccggacga
gtggaagctgcaagaacggctggtgtgtatgatgccgggctggaaacgctgcgtgccgat
agcttcaccatccttgcacgacagatcattcatacgcacgctgaaaccggggctgatacg
gaactgctgaccattcgggaacgcaggcggtccgaacccgttacgctaccgcaagcacgt
ggtctcggtcgtgaacgggagtccggatacgtccagaacacgcagtccggacgcgtcgcg
gttcgcatcccggctccgggactggtgacggaggaaggggagtatgagcggcgcatccgg
ctggtgaggcctatagagacgcaactccactccgttgacgcgttttcggccagccactgg
aagcctattgatcaggagactttcgtccctctttgggaggcggagttgcgcacggttgat
gagttcgtcgtaaccgaattccatatggtgacggggctgctgttgccggtctggaagcgc
ctgccgacggaccatgcccgggtctaccggctgcaaaccgatgacggcgagcgcgtgctt
ggccggcgcgtgcccgtggcgtgggccacgagtgccggggcggctggcagtctgtcgctg
tccgggcaggacgcgcgcgcagcactgctggacggtggaacggtcctccatctggccgaa
cggatgcaggtgcggcgggtccgggttatgggacggcagcgtatcgaactgaccggtttt
accgaagggatgcgggaacgcttgcgggcctacggcctgttttcggaaatcatctcgtgg
tcattgcggtttttcgtgccggtcgatgagaggggcgataaggttctggaacggctgttc
gagacatggccgatcgaacgcctgacggaaagggaggcggcatga
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