Acetobacter pomorum: CPF11_13875
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Entry
CPF11_13875 CDS
T05180
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
apom
Acetobacter pomorum
Brite
KEGG Orthology (KO) [BR:
apom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apom03032
]
CPF11_13875
03036 Chromosome and associated proteins [BR:
apom03036
]
CPF11_13875
03400 DNA repair and recombination proteins [BR:
apom03400
]
CPF11_13875
DNA replication proteins [BR:
apom03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CPF11_13875
Chromosome and associated proteins [BR:
apom03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CPF11_13875
DNA repair and recombination proteins [BR:
apom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CPF11_13875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ATI13568
LinkDB
All DBs
Position
pApBDGP5A:98593..98871
Genome browser
AA seq
92 aa
AA seq
DB search
MNSQDLIERIVAATDIQKKDAKTALETVFAAITEAAVKGDDTTIAGFGKFVVRQTAERKG
RNPQTGAELVIPASRKLAYTPAKAVKDALRVE
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacagccaggacttgattgaacgtattgttgctgcaacggacattcagaagaaggat
gccaaaacggctttggaaacagtttttgctgcgattactgaagctgcggtcaaaggcgat
gacacaactattgcaggatttggcaaatttgtggtgcgtcagacggcggagcgtaaaggt
cgcaacccgcaaacgggtgctgagctggtgatccctgcatctcgtaaactcgcctataca
cccgcaaaggccgtcaaggatgctctgagggtggaatag
DBGET
integrated database retrieval system
