Algimonas porphyrae: AB6B39_03005
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Entry
AB6B39_03005 CDS
T10736
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
apop Algimonas porphyrae
Pathway
apop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB6B39_03005 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apop03019
]
AB6B39_03005 (pnp)
03016 Transfer RNA biogenesis [BR:
apop03016
]
AB6B39_03005 (pnp)
Enzymes [BR:
apop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AB6B39_03005 (pnp)
Messenger RNA biogenesis [BR:
apop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AB6B39_03005 (pnp)
Transfer RNA biogenesis [BR:
apop03016
]
Prokaryotic type
tRNA degradation factors
AB6B39_03005 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
XER24054
LinkDB
All DBs
Position
595309..597522
Genome browser
AA seq
737 aa
AA seq
DB search
MFNKHSVTIDWAGRELTLETGQVARQADGAVMATYGETKLLATACYAKEARPGQNFFPLT
VNYMEKFYAAGKVPGGYFKREGRPTERETLISRLTDRPIRPLFPKGFRNEVQVVITVLQH
DLENEPDIIGMVAASAALALSGAPFAGPIGAARVGLIDGDYVLNPMLDEMVESELDLVVA
GTHEAIMMVESEAKELTEEQMLGAVMFAHEACQDVIEAIHDLVEKAGAKPAYDYVTPNLE
DEKKDVKKIAEKGIKAAYKKKDKMERQDALRDAKADAKTKLVVSDENPHGMTEAVFNDVF
KSVESETVRQSVIKTKKRIDGRKTDEVRPIEAMAGLLPRTHGSALFTRGETQAICVATLG
TSEDEQFVDQLTGTIKNKFMLHYNFPPYSVGETGRMGGTSRREHGHGKLAWRALQAVLPS
NEDFPYTIRLVSEITESNGSSSMATVCGCSLAMMDAGVPLKRPVSGIAMGLIKDDNGVAV
LSDILGDEDHLGDMDFKVAGTSEGITSLQMDIKIAGITEDIMETALAQAYDGRLHILDKM
NEALTESRESVGEFAPRIEQMSIPVDKIRDVIGSGGKVIREIVDTTGARVSVEDDGTIKI
ASNDQKSIDAAKEWITSLTAEPEAGKVYKGKVVKVVDFGAFVNFFGKKDGLVHVSMIKPE
RVNHPSDFLEEGQDVWVKLMGFDDRGKVRLSMKHVDQETGEEVEVEERARSKRDDDEDGD
DKPRRPRRRRSPRKDED
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaacattccgtcacgatcgattgggcgggccgcgagctcacattggagacc
ggtcaggttgcccgccaagccgacggtgccgtcatggccacttatggcgagaccaaactg
ctggcgacagcctgctatgccaaagaggcgcgtccggggcagaacttcttcccgctgacc
gtcaattatatggaaaaattctatgccgccggtaaggtgccgggtggctatttcaaacgc
gaaggccgtccgaccgagcgcgagacgctgatctcccgcctgaccgaccgtccgatccgc
ccgctgtttccaaagggcttccgcaacgaagttcaggtggtaatcacggtcctgcagcac
gacctcgaaaacgaacccgacattatcggcatggttgcggcgtctgctgctctggccttg
tccggcgcgccttttgccggtccgattggtgcggcccgcgtcggcctgatcgatggtgat
tatgtcctcaacccgatgctcgacgaaatggtcgagtccgaactcgacctcgttgtcgcc
gggacgcacgaagccatcatgatggtggaatccgaagccaaggaactgaccgaagagcag
atgctcggcgctgtcatgttcgctcacgaagcctgtcaggacgtcatcgaagcgatccac
gatctggtcgaaaaagccggcgccaaacctgcttacgactatgtcactccaaacctcgaa
gacgagaagaaagacgtcaagaaaatcgccgagaaaggcatcaaggcggcttacaagaag
aaagacaagatggagcgccaggacgcgctgcgcgatgccaaggcagacgccaagaccaaa
ctggtcgtttcggatgaaaatccgcatggcatgaccgaagccgtcttcaacgacgtgttc
aaatccgtcgaatccgagacggttcgccagagcgtgatcaagaccaagaagcgcatcgac
ggtcgcaagaccgacgaagtgcgtccgatcgaagccatggcgggtctgctaccccgtacg
cacgggtccgctctgtttacgcgcggcgaaacgcaggccatctgtgtggcaacgctgggc
acgtccgaggacgagcagttcgttgatcagctgaccggcacgatcaagaacaagttcatg
ctgcactataatttcccgccctactcggtcggggaaacgggacgcatgggcggcacgtcg
cgtcgcgaacatggccacggcaagcttgcctggcgcgcgctgcaggcggttctgcccagc
aatgaggacttcccctacacgatccgtctggtgtccgagatcactgagtccaacggctcc
tcatccatggcgacggtctgcggctgttcactggcgatgatggatgcgggtgttccgctc
aagcgtccggtttccggtatcgccatgggcttgatcaaggacgataatggcgttgccgtt
ctgtcggacattctgggtgatgaagatcaccttggcgacatggacttcaaggttgccggg
acaagcgaaggcatcacgtctttgcagatggacatcaagatcgccggcatcacggaagac
atcatggaaacggctctggcccaagcctatgacggtcgcctgcacattctcgacaagatg
aatgaagccctgaccgaaagccgtgagagcgtcggcgaatttgccccgcgcatcgagcag
atgagcattccggtcgacaagatccgtgacgtcatcggttccggcggcaaggtcatccgc
gaaatcgtcgacacgacaggtgcccgcgtctcggtcgaagatgacggcacgatcaagatc
gcgtccaacgaccagaaatccatcgacgccgccaaggaatggatcacatcgctgacggct
gagccagaagcgggcaaggtctataagggcaaggtcgtcaaggtcgtcgacttcggtgcc
ttcgtgaacttcttcggcaagaaggacggtctggttcatgtctccatgatcaagccagag
cgcgtcaatcacccgtccgatttccttgaagaaggacaagacgtctgggtcaagctgatg
ggctttgacgatcgcggcaaggttcgcctgtcgatgaaacatgtcgatcaggaaacgggc
gaagaagttgaagtcgaagaacgcgcgcgctccaagcgtgacgatgacgaagacggcgat
gacaagccccgtcgtccgcgtcgccgccgttcgccgcgtaaagacgaagactag
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