Algimonas porphyrae: AB6B39_04545
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Entry
AB6B39_04545 CDS
T10736
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
apop Algimonas porphyrae
Pathway
apop02024
Quorum sensing
apop03060
Protein export
apop03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
apop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AB6B39_04545 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AB6B39_04545 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB6B39_04545 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
apop02044
]
AB6B39_04545 (ffh)
Enzymes [BR:
apop01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
AB6B39_04545 (ffh)
Secretion system [BR:
apop02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AB6B39_04545 (ffh)
Eukaryotic Sec-SRP protein
AB6B39_04545 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_33
FAD_binding_4
APS_kinase
AAA_31
nSTAND3
Thymidylate_kin
6PF2K
Mlf1IP
AAA_19
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
XER24346
LinkDB
All DBs
Position
909595..911193
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AA seq
532 aa
AA seq
DB search
MFEALGDRLGGVFDTLTGRGALTERDVDAAMREIRKALLEADVALPVVKQFVAKVREEAV
GERVIKAVKPGQQVVKIVNDALIQTLGGTLSEDDADMAAVRAASELNLNAKPPVVILMAG
LQGSGKTTTTGKLALYLRERAKKKVMLASLDTNRPAAMDQLGMLADKSGTGFLPIVKGQS
AVEITQRALKEAAKGGYDVLFLDTAGRTTINEELMAEVIEVARIAQPTETLLVADALTGQ
DAVETAARFNEALPLTGLVLTRIDGDGRGGAALSMKAVTGLPIKFLGTGEKLDGLEQFDA
ERLAGRILGQGDVVALVEKASALIDEKDAARAAEKMAKGEFDLDDLANQLGQMSKLGGMG
GIMKLLPGMGKMKKQMDAMGGVDDNLLSRQRAVILSMTPWERKNPKLIKASRKKRIAAGS
GVQVSEVNKLLKMHRQMSDMMKKMGKGGMAGMAAQMAGMPGMPKGAMKGLGGGMGGMPNP
ADMDPAQLEELKKQMGSSLPGLGKLPGLGGGGLPGLGGGGLPGLGGSPKFKK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgaagctcttggagatcgattaggcggtgttttcgacacgctgacgggtcgcggc
gcgctgacagagcgcgacgtggacgcagccatgcgcgaaatccgcaaggcgctgctcgaa
gccgatgtcgccctgccggtcgtcaagcagttcgtcgccaaggtgcgggaagaagctgtc
ggcgagcgcgtcatcaaggcggtcaaacccggtcagcaggtcgtcaagatcgtcaatgat
gcgctgatccagacgctgggtggcacattgtcagaagacgatgccgacatggcggcggtc
cgtgccgcctcggaactcaatctcaatgccaaaccacccgtcgtcattctgatggcgggt
ctgcaaggttccggcaagacgacgacgacgggcaagctggcgctctatctgcgcgagcgc
gccaagaagaaggtcatgctcgcctcgctcgatacgaaccgtccggcggcgatggatcag
ctcggcatgctggcggacaaatccggcacgggcttcctgccgatcgtcaagggccaatcg
gccgtcgagatcacgcagcgcgccctcaaggaagcggctaaaggcggctatgacgtgctg
ttcctcgacacggcgggccggaccacgatcaatgaagaactgatggcggaagtcatcgag
gtcgcgcgcatcgcgcagccgaccgagacgctgcttgtcgccgatgcgctgaccgggcag
gatgcggtggaaacggcggcgcgcttcaacgaagccctgccgctgaccggtctggtcctg
acgcggattgatggtgatggccgcggcggtgcggcgctttcaatgaaggctgtcacgggc
ctgccgatcaagttcctcggtacgggcgagaaactggacgggctggaacagttcgatgcc
gaacggctggcggggcgcattctgggacagggcgacgtggtcgcgctggtcgagaaggcg
agcgcgctgatcgacgaaaaggacgcggcgcgcgcggccgaaaagatggccaagggcgag
ttcgatctcgacgatctggccaatcagcttggccagatgtccaagctcggcggtatgggc
ggaatcatgaaattgctgcccggcatgggcaagatgaagaagcagatggacgccatgggc
ggcgtcgatgacaatttgctctcgcgtcaacgcgccgtcatcctgtccatgaccccgtgg
gaacgcaaaaaccccaaactcatcaaggcgtcgcgcaagaagcggatcgccgccggttca
ggcgtacaggtctccgaagtcaacaagctgctgaagatgcaccgtcagatgtccgacatg
atgaaaaagatgggcaagggcgggatggctggaatggccgcgcagatggcgggcatgccc
ggcatgcctaagggtgcgatgaagggccttggcggcggaatgggcggcatgcccaaccct
gccgacatggacccggctcagctcgaagaactcaagaaacagatgggctccagcctgccg
ggtctcggcaaactccctggactgggcggaggtggcctccccggtctcggtggtggcggc
cttcccggtttgggtggcagtccgaaattcaagaaataa
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