KEGG   Algimonas porphyrae: AB6B39_07930
Entry
AB6B39_07930      CDS       T10736                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
apop  Algimonas porphyrae
Pathway
apop00010  Glycolysis / Gluconeogenesis
apop00020  Citrate cycle (TCA cycle)
apop00260  Glycine, serine and threonine metabolism
apop00280  Valine, leucine and isoleucine degradation
apop00310  Lysine degradation
apop00380  Tryptophan metabolism
apop00620  Pyruvate metabolism
apop00630  Glyoxylate and dicarboxylate metabolism
apop00640  Propanoate metabolism
apop00670  One carbon pool by folate
apop00785  Lipoic acid metabolism
apop01100  Metabolic pathways
apop01110  Biosynthesis of secondary metabolites
apop01120  Microbial metabolism in diverse environments
apop01200  Carbon metabolism
apop01210  2-Oxocarboxylic acid metabolism
apop01240  Biosynthesis of cofactors
Module
apop_M00009  Citrate cycle (TCA cycle, Krebs cycle)
apop_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
apop_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:apop00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    AB6B39_07930 (lpdA)
   00020 Citrate cycle (TCA cycle)
    AB6B39_07930 (lpdA)
   00620 Pyruvate metabolism
    AB6B39_07930 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    AB6B39_07930 (lpdA)
   00640 Propanoate metabolism
    AB6B39_07930 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AB6B39_07930 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    AB6B39_07930 (lpdA)
   00310 Lysine degradation
    AB6B39_07930 (lpdA)
   00380 Tryptophan metabolism
    AB6B39_07930 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    AB6B39_07930 (lpdA)
   00670 One carbon pool by folate
    AB6B39_07930 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:apop04147]
    AB6B39_07930 (lpdA)
Enzymes [BR:apop01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     AB6B39_07930 (lpdA)
Exosome [BR:apop04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   AB6B39_07930 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 HI0933_like GIDA FAD_binding_3 DAO FAD_oxidored 2-Hacid_dh_C Amino_oxidase 3HCDH_N AlaDh_PNT_C Trp_halogenase Lycopene_cycl Thi4 PT-TG NAD_binding_7 2OG-FeII_Oxy_6
Other DBs
NCBI-ProteinID: XER22066
LinkDB
Position
1634241..1635626
AA seq 461 aa
MSDFDVIIIGSGPGGYVTAIRGSQLGLKVAIVEKAELGGVCLNWGCIPTKAMLRSAEIYE
NMQHAKAYGLSAETGYDLKAIVKRSRDIAGQLSAGVKHLMKKNKITVIAGHATLKSGEPA
PIVTVDGKDYTAEHVIVASGARARVIPQAGLEPDGQFIWTAREAMVPDTIPDRLLVIGSG
AIGMEFASFFSAFGAKTTVVEMMDRILPAEDAEVSAFAQKQFEKRGLSFRLNTQASIKTG
KSAVTATFTKDGKEETAEFDRVILAVGIVGNVEDMGLEELGVKIDRTHIQIDEFSGTGVP
GLYAIGDVTGPPWLAHKASHEGIICIEKIAGQNPHPLDPNRIPGCTYCHPQVASVGHTEA
QAEEAGFDVKTGKFPFIGNGKAIALGEPEGFVKTVFDAKTGELLGAHMIGAEVTELIQGY
AIAQTLETTEHELIETVFPHPTLSEMMHEATLSAFDRTIHF
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgtcagatttcgacgtcatcattatcggatccggcccgggcggttatgtgaccgccatt
cgcggcagtcagctcggactgaaagtcgctatcgtcgagaaggcggaactgggcggcgta
tgtctgaactggggctgcatcccgaccaaggcgatgctgcgctccgctgaaatctacgag
aatatgcagcatgccaaggcttacgggctgagcgccgagacgggctatgatctgaaagcg
atcgtcaaacgctcgcgcgatattgccgggcagctctccgctggcgtcaagcatctgatg
aagaagaacaagatcacagtgattgcgggacatgccacgctcaagtccggcgagcctgcg
cctatcgtcaccgtggatggcaaggactatacggctgagcatgtcatcgtcgcatccggc
gcccgcgcgcgggtgattccgcaggccggactcgaaccggacggacagttcatctggacg
gctcgcgaagccatggttcccgatacgattccggaccgtctgctggttatcggctccggt
gcgatcggcatggaatttgccagcttcttctctgctttcggcgccaagacgacggtcgtg
gaaatgatggaccgtatcctgccggccgaggacgctgaagtctcggctttcgcccagaag
cagtttgaaaagcgcgggctgtcattccgtctcaatacgcaagcgtcgatcaagaccgga
aaatccgccgtgaccgcgacgtttacgaaggatggaaaagaagaaaccgcagaattcgac
cgggtcatcctggctgtcgggatcgtcggcaatgtcgaggatatgggactggaagagctg
ggcgtcaaaatcgaccggacccacattcagatcgatgaattttcaggaactggcgtgccg
gggctttatgcaattggcgatgtaaccgggccgccctggctcgcgcacaaggcgtcacat
gaaggcattatttgcatcgagaagattgcgggccagaacccgcatccgctggatccgaac
cggattccgggctgcacctactgccatccccaggtcgcgtccgtcggtcataccgaagcg
caggccgaagaggcgggcttcgacgtgaaaaccggcaagttccccttcatcggcaatggc
aaggcgattgcgctgggcgagcctgaagggttcgtcaaaaccgtcttcgacgcgaaaacg
ggcgaactgctcggtgcgcatatgatcggcgcggaagtgacggaactgatccagggctac
gccatcgcgcagacgctggaaacgacggagcatgagctgatcgaaacggtgttcccgcat
ccgacgctttcagagatgatgcacgaagccacattgtcggcctttgaccggacgatccac
ttctag

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