Algimonas porphyrae: AB6B39_08390
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Entry
AB6B39_08390 CDS
T10736
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
apop Algimonas porphyrae
Brite
KEGG Orthology (KO) [BR:
apop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apop03032
]
AB6B39_08390 (gyrA)
03400 DNA repair and recombination proteins [BR:
apop03400
]
AB6B39_08390 (gyrA)
Enzymes [BR:
apop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AB6B39_08390 (gyrA)
DNA replication proteins [BR:
apop03032
]
Prokaryotic type
DNA Topoisomerases
AB6B39_08390 (gyrA)
DNA repair and recombination proteins [BR:
apop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB6B39_08390 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
XER22154
LinkDB
All DBs
Position
1724550..1727360
Genome browser
AA seq
936 aa
AA seq
DB search
MSDDTDEPAENSPAREDGVSPITIEEEMKRSYLDYAMSVIVSRAIPDVRDGLKPVHRRIL
YSMHENGFTRDKPYKKSARVVGDVIGKYHPHGDSAVYDALVRMAQDFSMRLPLLDGQGNF
GSVDGDPPAAMRYTEVRMDNPAAQLLADIEKNTVNFQDNYDASESEPVVLPARFPNILVN
GAGGIAVGMATNIAPHNLGEVCDAAMALLDNGALSDSELLDIIPGPDFPTGGQIMGRSGA
KQGVLTGRGTVTVRAKTEVEEIRKDRYAIIVSEIPFQVNKASMITKIAALVNEKRIEGIS
AVRDESDRVGMRVVIELKRDAVADVVLNQLYRYTPLQQNFSSNMLALNGGKPEQMNVRQM
LEAFLSFREDVIARRTKFDLAKARDRAHILVGLATAVANIDEIIRLIRTSPNPAAAREAL
TARNWPAESMGALIRLIADPRSRLQDDGTIKLTEEQARAILDLRLQKLTALGMEEITDEA
EKLAAKITDLLEILRSRDRVQTIIRDELTEVRETFATPRRSVFMDGGFDFDDEDLIAVED
MVVTVTNNGYVKRTPLDTYRSQHRGGKGRSGMQTKDEDFVTTVFVATTHTPILLFSSSGM
AYKLKVWKLPQGGAATRGRSFNQLLPLDRNGGDGDEKITSIMALPENEDDWAGLDIMFAA
RSGGVRRNSLADFTRVNRNGKIAMKPDEGDGIVDVRVVSEDDDIMLTTAEGKAIRFRVTD
VRRFNSRSSTGVRGIKLSGDDHVISMAVLRHVDLTIEERNAYLKRSAIERRALGDDVEDG
VDDDEGEVEASLSDERYGALSAAEQFVLTLADDGLGKRTSCYRYKVQGRGGGGLKAQNLD
RGSKAADAKLVRSFVVEDNDQIMLVTDGGQLLRTGVSNISIVSRSSKGVWVIRTREDEHV
VSVERIADTDDEDADAADSPDTSTEIDRPDDGSDTG
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgatacggacgaaccggctgaaaattcgcccgcccgcgaagatggcgtctcc
ccgatcactatcgaagaggagatgaaacgctcctatctcgactatgcgatgagcgtgatc
gtcagccgggccattccggatgtgcgcgacggtctgaaacccgttcatcgacgtatcctt
tattcgatgcacgagaacggcttcacgcgcgacaaaccctataagaaatcggcccgggtc
gtcggtgatgtgatcggtaaatatcacccgcatggcgacagtgccgtctatgacgcgctg
gtccgcatggcgcaggatttttccatgcgcctgccactgctcgacgggcagggtaatttc
ggctcggtcgatggcgatccgcctgctgcgatgcgctataccgaagtccgcatggataat
ccggcagcgcagctcctcgcggacatcgaaaagaataccgtcaattttcaagacaattac
gatgcgtccgaatccgagcctgtggttctgccggcccggtttccaaatattctggtcaat
ggcgctggcggtattgccgtcggtatggcgaccaatatcgcgccgcataatctcggggaa
gtctgcgacgccgccatggcgctgctcgataatggcgcgctgagcgacagcgaattgctg
gacatcattccggggcctgacttcccgaccggcggccagatcatgggtcgcagcggggcc
aagcagggcgtgctgacagggcgcggaaccgtgaccgtgcgggccaagaccgaggtcgag
gagatccgcaaggatcgctatgcgatcatcgtctcggagatcccgttccaggtgaacaag
gcttccatgatcaccaagattgccgcgctggtgaatgaaaagcggatcgaaggtatttcc
gccgtgcgcgacgagtccgaccgtgtcggcatgcgggtcgtcatcgagttgaaacgcgac
gccgtcgccgatgtcgttctcaatcagctctatcgctataccccgctacagcagaatttc
agttccaacatgctggcgctgaacgggggcaagccggaacagatgaatgtccgtcagatg
ctggaagcctttctcagcttccgcgaagacgtcattgcccgccgcaccaagttcgatctc
gccaaggcgcgggaccgggctcacatattggtgggcctggcaaccgcagttgcgaatatt
gacgaaattatccgcctgatccgcaccagccccaatcctgccgcggcccgcgaagcgctg
acggcgcgaaactggccagctgaaagtatgggtgcattaatccggctgatcgccgatccg
cgctcccgcctgcaggatgacggcacgatcaagctgacggaagaacaggcccgcgccatt
ctcgatctgcgtctgcagaagctgacggcgcttggcatggaggaaatcacggacgaagcg
gaaaagctggcagcgaaaatcaccgacctactggaaattttacgctcgcgtgaccgcgtc
cagacgatcattcgcgacgagctgacagaggtccgcgagactttcgcgacaccgcggcgc
agcgtgttcatggatggtggcttcgactttgacgatgaagacctcatcgcggttgaggac
atggtcgtaactgtgacgaataatggctacgtcaagcgcacaccgctggatacgtaccgc
tcgcagcatcgtggcggtaaaggtcgttcgggtatgcagaccaaggacgaggatttcgtc
acgacggtctttgtcgcgaccacccatacgccgatcctgctcttttcatccagcggcatg
gcttacaagctcaaggtgtggaagctgccgcaaggtggggctgcgacccgtgggcgaagt
tttaatcagctcctgcctctggacagaaatggcggcgacggcgacgagaagatcacctcg
atcatggcgctgccggagaatgaggacgattgggccgggctggatatcatgttcgccgca
cggtccggcggcgtgcgtcgcaacagtctggcggacttcacgcgagtcaaccgtaacggc
aagatcgcgatgaaaccggatgaaggcgacgggatcgtcgacgtccgggttgtcagcgaa
gatgatgacatcatgctgaccacggcagaaggcaaggcgatccggttccgcgtcacagat
gtacggcgtttcaacagccggtcatcgaccggtgttcgcgggatcaagctgtccggcgac
gatcatgtgatcagcatggccgttctgcgtcatgtcgatctcaccatcgaagaacgaaac
gcctatctcaagcgctcggccatagagaggcgggcgctgggcgacgacgttgaagacggg
gtcgatgacgatgagggtgaagtcgaagccagcctgtcggatgagcgctacggtgcgctc
agcgcggcggagcagttcgtcctgaccctggccgatgacgggctgggtaaacggacatcc
tgttaccgctacaaggttcaagggcgtgggggcggcggcctcaaggcgcagaatctggac
cggggcagcaaggccgctgacgcaaaactggtccgcagtttcgtcgtcgaggataatgat
cagatcatgctggttacggatggcgggcagctgctgcggaccggcgtcagcaacatttcg
atcgtatcgcgcagctccaagggtgtctgggttatccggacgcgcgaagacgaacatgtc
gtcagtgtcgagcggattgccgatacggatgatgaggatgctgacgcagccgactcgcct
gacacctcaaccgagatcgaccgtcctgacgatggttcagacacggggtga
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