Algimonas porphyrae: AB6B39_08920
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Entry
AB6B39_08920 CDS
T10736
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
apop Algimonas porphyrae
Brite
KEGG Orthology (KO) [BR:
apop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apop03032
]
AB6B39_08920
03036 Chromosome and associated proteins [BR:
apop03036
]
AB6B39_08920
03400 DNA repair and recombination proteins [BR:
apop03400
]
AB6B39_08920
DNA replication proteins [BR:
apop03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AB6B39_08920
Chromosome and associated proteins [BR:
apop03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AB6B39_08920
DNA repair and recombination proteins [BR:
apop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AB6B39_08920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_bac_1
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
XER22257
LinkDB
All DBs
Position
complement(1850379..1850645)
Genome browser
AA seq
88 aa
AA seq
DB search
MNKKELVGKLADHLDTSQSAAGDALNGVLDIITAELKAGNEVNLPGFGKFIAKHRPARQM
RNPQTGEQMMSKEKTSAQFKPSVGLKDL
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaagaactcgtcggcaaactggctgaccatctcgacaccagccagtctgcc
gctggcgacgccctgaacggcgttctggatatcatcacagccgagctgaaagccggcaat
gaagtgaacctgcccggtttcggcaaattcatcgccaagcatcgccctgcccgccagatg
cggaacccgcagacaggcgaacagatgatgagcaaggaaaagacctccgctcagttcaaa
ccaagcgtgggcctgaaagacctctag
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integrated database retrieval system
