Algimonas porphyrae: AB6B39_11805
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Entry
AB6B39_11805 CDS
T10736
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
apop Algimonas porphyrae
Pathway
apop03030
DNA replication
apop03430
Mismatch repair
apop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB6B39_11805
03430 Mismatch repair
AB6B39_11805
03440 Homologous recombination
AB6B39_11805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apop03032
]
AB6B39_11805
03400 DNA repair and recombination proteins [BR:
apop03400
]
AB6B39_11805
Enzymes [BR:
apop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB6B39_11805
DNA replication proteins [BR:
apop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB6B39_11805
DNA repair and recombination proteins [BR:
apop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB6B39_11805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
RuvB_N
AAA_30
AAA_5
TsaE
AAA_19
AAA_24
AAA_14
AAA_assoc_2
AAA_2
DUF815
AAA_18
VapE-like_dom
SRP54
nSTAND3
PduV-EutP
RcsF
Rad17
ABC_tran
AAA_33
AAA_28
Glyco_tranf_2_5
Cdc6_lid
Motif
Other DBs
NCBI-ProteinID:
XER22796
LinkDB
All DBs
Position
complement(2420934..2422682)
Genome browser
AA seq
582 aa
AA seq
DB search
MSDSATNQTYQVLARKYRPSTFEDMIGQDAMVTTLKNAFETGRIAHAFMLTGVRGIGKTT
TARLLARALNYQTDAIDSPSVDLATPGRHCEAIMASTHMDVLEMDAASRTGVDNMRELLD
GVRYAPADARYKVYIIDEVHMLSAGAFNALLKTLEEPPDHAKFIFATTEIRKVPITVLSR
CQRFDLRRVEGDVLAQHLKGIAGQEGIAVSDDGLSLIARAAEGSVRDGLSLLDQAIVQSG
LSGDEVTAEQVRTMLGLADRVRLIDLFEHAMSGDAKAALNAMRAQYDDGAAPDVVMGDLL
DICHEVSRAQTLGSDAAFDFAPDQVERLRHLGERFSTGQLTRAWQILMGSHAEVRQAPVP
LAAAEMALLKLSLAGQMPPPELAAQIIREAQKMESEGGAGLPTLTPPSDAPTAPLNDDPA
PASTQPSASGSTTQTAQAVAMTPPKPVTPAAPTMRLDSFKTYVEQIDDLRLRSDLERYVS
VVSFTEGQAEIHITEPRHNALVGRMVRSLQELTGQQWLVSPVDQPGEPPLADQRRSAKAA
QMQADRAHPAFDHPLLKGAKLLEIRDRAPNVIAADFKSGENE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagcgcgacaaaccagacctatcaggttcttgcccggaaataccgtccctcg
accttcgaggatatgatcgggcaggatgcgatggtcacgacgctgaaaaatgcgttcgag
acgggtcgcatcgcccatgccttcatgctgaccggcgtgcgcggcatcggcaagacgacg
acagcgcgcctgctggcgcgcgctctgaactatcagacggatgcaatcgacagcccgtcc
gtggatctggccacgccgggccgccactgcgaagccatcatggcgtcgacccatatggac
gtgctggaaatggacgcggcttcgcgcaccggcgtggacaatatgcgcgagctgctggac
ggggtgcgctatgcgcctgcggatgcgcgctacaaggtctatatcatcgacgaggtccac
atgctcagcgcgggcgcgttcaacgccctgctgaagacgctggaagagccgccggaccat
gccaagttcatcttcgccacgaccgaaatccgcaaagtgccgattacggtgctgtcgcgc
tgccagcggttcgacttacgccgcgtcgagggcgatgtcctcgcccagcatctgaaaggg
attgccgggcaggagggcatcgccgtgtcagacgacggattgtcgttgatcgcgcgcgct
gccgagggctcggtccgtgacgggctgtccctgctcgaccaggcgatcgtgcaaagcggg
ctgtccggcgatgaagtcaccgcggaacaggtccggaccatgctcggcttggccgaccgg
gttcggctgatcgatctgttcgagcatgcgatgagcggcgatgcgaaagcggcgctgaac
gccatgcgggcgcaatatgatgacggggcggccccggatgtcgtgatgggggacctgctg
gatatctgtcatgaagtgtcccgagcgcagacgctgggcagtgatgccgctttcgatttc
gcgccggatcaagtggaacggttacgtcatctcggcgagcgtttcagcacgggccagctg
acccgggcctggcagatcctgatgggatcccatgcggaggtccggcaggcccccgtgccg
ctggccgcagccgaaatggcattgttaaagctgtctctggcagggcagatgccgccaccc
gaactggccgcgcagatcatccgcgaagcgcagaagatggagagcgagggcggcgcggga
ttgccgacgctcacaccgccgtcggacgcaccgaccgcgccgctcaatgatgatccggcc
ccggcgtcaactcagccatccgcatcgggttcgacgacgcaaacggctcaggccgtcgca
atgacgccacccaaacccgtaacgccggctgcgccaaccatgcggctggacagtttcaag
acttatgtcgagcagattgacgatctgcgtctgcggtcggatctggaacgttatgtcagc
gtcgtcagctttacggaggggcaggcggaaatccatattaccgagccacgccataatgcg
ctggtcgggcggatggtgcgatcgctgcaggaactgacgggtcagcaatggctggtcagc
ccggtcgatcaacccggtgagccaccgctggcagaccagcgccgctccgccaaggcggcg
cagatgcaggcggaccgcgcgcatcccgctttcgatcatccgctgctaaaaggtgccaag
ctgcttgagatcagggaccgggctcccaatgtgatcgctgcagacttcaagagcggagaa
aacgaatga
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