Algimonas porphyrae: AB6B39_12305
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Entry
AB6B39_12305 CDS
T10736
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
apop Algimonas porphyrae
Pathway
apop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
apop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AB6B39_12305 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
apop01007
]
AB6B39_12305 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apop03016
]
AB6B39_12305 (aspS)
03029 Mitochondrial biogenesis [BR:
apop03029
]
AB6B39_12305 (aspS)
Enzymes [BR:
apop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
AB6B39_12305 (aspS)
Amino acid related enzymes [BR:
apop01007
]
Aminoacyl-tRNA synthetase
Class II (A)
AB6B39_12305 (aspS)
Transfer RNA biogenesis [BR:
apop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
AB6B39_12305 (aspS)
Prokaryotic type
Other AARSs
AB6B39_12305 (aspS)
Mitochondrial biogenesis [BR:
apop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
AB6B39_12305 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
XER24989
LinkDB
All DBs
Position
complement(2515161..2516978)
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AA seq
605 aa
AA seq
DB search
MHDYRSHTCNALRSDHVGLTARLSGWVHRKREHANALFIDLRDHYGITQVIVHADADFYE
TAKRVPSESVITVTGTVVARDADAQNDKLATGDIELHADVFVVESAAESLPLPVFGEPDY
PEDIRLTHRYLDLRRETLHKNILLRGQVINSLRRRMIDQGFTEFQTPILTASSPEGARDF
LVPSRLNPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE
MSFVTQEDVFGAIEPVMAGVFEEFADGRKVETPFPRIPYREAMSKYGSDKPDLRNPILLK
DVSDYFTDESKTGFGIFAKITGSGGKVIAIPAPGATDSQSRKFFDSLDKWAKKEMQAPGL
GYARLREEDGAVVSQDPALKNFDPAHLKALLDDMGLKAGDGVFFSAGKKDAAYKLAGAAR
DKIGHDLGLIEEGIFKFCWIVDFPMYEWDEDNKKVEFSHNPFSMPQGGMAALEAADTVEK
QLDLLAWQYDIVCNGVELSSGAIRNHKPDIMYKAFELAGYDKSVVDTEFAGMINAFKYGA
PPHGGIAPGVDRIVMLLAGVDTIRDVILFPMNGQAQDLMMNAPAEVSKEQLKELHLKLVP
VEKDA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcacgattatcgcagccatacctgcaacgcccttcgctccgaccatgtggggctgacc
gcccgcctgtcgggctgggttcaccgcaagcgcgagcacgccaatgcgttattcatcgac
ctgcgcgaccattacggaatcacgcaggtcatcgtgcacgcggacgctgatttctacgag
accgccaagcgcgtcccgagcgagagcgtcatcacggtgacgggcacagtcgtcgcgcgc
gacgccgacgcgcagaatgacaagctggccacgggcgatatcgagttgcatgcggatgtt
ttcgttgtggaaagcgcggccgaatccctgccgctgcctgtcttcggcgagccggactat
cctgaagatatccgcctgacgcaccgctatctcgacctgcgtcgggagacgctgcacaag
aacatcctgctgcgcgggcaggtcatcaacagcctgcgtcgtcgcatgatcgatcagggc
tttaccgagttccagactccgatcctgaccgcgtccagcccggaaggcgcacgcgatttc
ctcgttccgagccgcctgaatcccggcaaattctacgccctgccgcaagccccgcagcag
ttcaaacagctgatcatggtggcgggtttcgaccgctacttccagatcgctccctgtttc
cgtgacgaagatgcccgtgccgaccgttcccccggtgagttctaccagctcgatgtggag
atgagtttcgtcacgcaggaagatgtcttcggcgcgatcgagcccgtcatggcaggcgta
ttcgaggaatttgccgatggtcgtaaggtcgaaacgccgttcccgcgcattccgtaccgc
gaagccatgtccaaatacggctctgacaagcctgacctgcgcaatccgatcttgctcaag
gacgtgtcagactatttcacggatgagagcaagacgggtttcggtatcttcgccaagatc
accggttccggcggcaaggttatcgccattccggcacccggtgcgacggacagccagtcg
cgcaaattcttcgacagcctggacaagtgggcgaagaaggaaatgcaggcgcccggtctc
ggctatgcgcgcctgcgtgaggaagacggcgccgtcgtcagtcaggatccggcgctcaag
aatttcgatcccgcacacctcaaggccctgctcgacgatatggggttgaaagcgggcgac
ggcgtcttcttctcggcagggaaaaaggacgcggcctacaagttggcaggcgcggcccgc
gacaagatcggtcatgatcttggcctgatcgaagagggcatcttcaaattctgctggatc
gtcgatttccccatgtatgagtgggacgaggacaataaaaaggtcgaattctcccataac
ccgttctccatgccccaaggcgggatggcggcgctggaagcggcggatacggtcgagaaa
cagctggatctgctggcctggcagtatgacatcgtctgcaacggcgtcgagctcagctca
ggcgcgatccggaaccacaagccggacatcatgtataaggcattcgagttggccggttac
gacaagtccgtcgtcgatacggaatttgccggcatgatcaatgcgttcaaatatggcgcg
ccgccgcatggcgggatcgcaccgggtgtcgaccgcatcgtcatgctgctcgccggtgtc
gacacgattcgcgatgtcatcctgttcccgatgaacggtcaggcgcaggatctgatgatg
aacgcccctgccgaagtctcaaaggagcagctcaaggaactgcacctgaaactcgtgccg
gtcgaaaaggacgcgtga
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