Algimonas porphyrae: AB6B39_15380
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Entry
AB6B39_15380 CDS
T10736
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
apop Algimonas porphyrae
Pathway
apop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
apop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB6B39_15380 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apop03400
]
AB6B39_15380 (mutM)
Enzymes [BR:
apop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AB6B39_15380 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AB6B39_15380 (mutM)
DNA repair and recombination proteins [BR:
apop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB6B39_15380 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_IS1595
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
XER23472
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All DBs
Position
3161313..3162149
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AA seq
278 aa
AA seq
DB search
MPELPEVETVRRGLAPVLEGRIISHVQLNRPDLRFPFPDDFADRIEGQRVERLSRRAKFL
QADLTSGERLFMHLGMSGRFVLGGSQLGEFTHAHDADPKHHHVIFTTEDGNTVTYNDPRR
FGFMELVKPDAPYRLDDLGPEPLGNGFNAPDLRARLKGKKTPIKIALLDQRIVAGLGNIY
VCEALFRAGISPGRGAGRLRVAETERLVGHIKAVLIEAIAAGGSSLRDHRQADGALGYFQ
KQFSVYGREGQDCPACAAPIARRVQGGRSTFYCKACQR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactccccgaagtcgaaacggttcgccgcggtctcgcccctgttctggaaggc
cggattatctcgcatgtccaactgaaccgtccggatcttcgctttccctttccggacgac
ttcgccgaccgcattgaggggcagcgcgtggagcgtctgtcgcgccgggccaaattcttg
caggcggacctgacctcaggcgagcgtctgttcatgcatctgggtatgagcgggcggttt
gtgcttggcggctcacagctcggcgagttcacccatgctcacgatgccgatccgaaacat
catcatgtcattttcacgaccgaagacggcaataccgtcacctataatgatccgcgccgc
ttcggcttcatggagctggtgaaaccggacgcgccctaccgtctcgatgatctggggccg
gagcccctcggcaacggcttcaacgcccccgatctgcgcgcccggctcaagggtaagaaa
acgccgatcaagatcgccctgctggatcagcggatcgtggcgggccttggcaatatctat
gtctgcgaagccctgttccgggccgggatcagccccgggcgcggggccggacggctacgc
gtggctgaaaccgaacggctggtcgggcacatcaaggcggtactgatcgaagccatcgcg
gcaggtgggtcatccctgcgcgaccaccgccaggccgacggcgcactcggctatttccag
aaacaattctccgtctatggccgtgaagggcaggactgccccgcctgcgccgcgccgatt
gcacgtcgtgtccagggcggacgcagcaccttctactgcaaggcctgtcaacgctga
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