Actinobacillus porcitonsillarum: DDU33_00830
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Entry
DDU33_00830 CDS
T05443
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
apor
Actinobacillus porcitonsillarum
Brite
KEGG Orthology (KO) [BR:
apor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apor03021
]
DDU33_00830 (rpoH)
Transcription machinery [BR:
apor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DDU33_00830 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
HTH_25
UCR_14kD
GntR
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
AWI50128
UniProt:
A0A2U8FGM4
LinkDB
All DBs
Position
161357..162322
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AA seq
321 aa
AA seq
DB search
MKNFDEHEIEDAEIVEAESIEPDEVELLDEDKHIETTHPALLSANMPVTTGNLESYIRMA
NQYPILTADQEKELAERYYYDEDVEAAKQLILSHMRFVIHIARGYLGYGLPLADLIQEGN
IGLMKAVKRFDPNVGVRLVSFAVHWVKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKNK
NRLAWFNEEEIKRVAHDLGVSEEEVREMESRMTGQDLGFDLPSGDDEDEAYTPSMYLEDN
SSNFADELEDEEHTGEATAQLAYALSTLDERSQDIIKTRWLDENKLTLHDLAAKYQISAE
RVRQLENAALKKIKNAITVDA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactttgacgaacacgaaattgaagatgctgaaattgttgaagcagagagcatt
gagcctgatgaagtagaattactagatgaagataagcatattgagacaacgcatccggca
ttgctttccgcaaatatgcctgttacgacaggaaatcttgaaagctatattcgtatggca
aatcaatatcctattttaacggcagaccaagaaaaagaacttgcagaacgctactattac
gatgaagatgttgaagcagcaaaacaactgattttgtcccatatgcgtttcgttatccat
attgctcgaggctatttaggttatggcttacctcttgcggatttaattcaagaaggcaat
atcggattgatgaaagcggtaaaacgctttgatccgaatgttggcgttcgtttggtctct
tttgcggtacattgggttaaagcagaaattcatgaatatgtattaagaaactggcgaatt
gtaaaagtcgcaacaacaaaagcacagcgaaagctcttttttaacttaagaaaaaataaa
aatcgtttggcgtggtttaatgaagaggaaatcaaacgtgttgcgcacgatcttggtgta
tctgaagaagaagttcgtgaaatggaatcccgtatgacagggcaagatcttgggtttgat
ttgccaagtggcgatgatgaagatgaagcatatacgccttcaatgtatttagaagataat
agctctaattttgctgatgaactggaagatgaagagcacacaggagaggctacagcacag
cttgcatatgcactatcaacgttagatgagcgtagccaagatattatcaaaacgcgctgg
ctagatgaaaataagctcactttgcatgatttagctgcgaaatatcaaatttctgcggaa
cgtgtgcgtcagcttgaaaatgcggcgctgaagaaaattaaaaatgcaattactgttgat
gcataa
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