Actinobacillus porcitonsillarum: DDU33_05080
Help
Entry
DDU33_05080 CDS
T05443
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
apor
Actinobacillus porcitonsillarum
Brite
KEGG Orthology (KO) [BR:
apor00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
apor01002
]
DDU33_05080
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
apor01011
]
DDU33_05080
Peptidases and inhibitors [BR:
apor01002
]
Cysteine peptidases
Family C82
DDU33_05080
Peptidoglycan biosynthesis and degradation proteins [BR:
apor01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
DDU33_05080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
T7_gp14
Motif
Other DBs
NCBI-ProteinID:
AWI50890
UniProt:
A0A2U8FIR5
LinkDB
All DBs
Position
1003622..1005235
Genome browser
AA seq
537 aa
AA seq
DB search
MNKIKLLPLMMALSSVAIAETSSQTNMSAEQTSTAVVNVPTVPQTAPVSQPIHDGVLPQL
SFEAQQARAAELSKRADYAYEQEQIRQEQARKLAAAEQKVKQTVGNNDLLLSSTTSKVYL
DNDFSPMWNDKSATRQFLKEYAAFAASGVSPKSAKALQQILNQPEGLARDMLLTDSFLDY
LYYNKNVYRNANNWLYNLGSYSPKAPSGEQIASWVKSVKSGSSGQFVANLVPRNHIYQET
VQRLFVMSPGASTSTKKATKGKSKNVAATPVDEVAATGSSSFYKLALNAQRLRIIPSFNN
GIFVNIPSYQLYYFRDGQLALQSKVIVGREDRRTPVMYSKLSNVVVNPPWNVPTSILTKD
IVPKLARNPGIADSLSYEILDGSGNKVNPRSVNWSQYLNAKSIPYRIRQKAGDDSALGRY
KFNMPSSDAIYLHDTPNHGLFSRTDRALSSGCVRVAKSSELASILLKEAGWSAEKQQSVL
ASKKTTSANIRSDNPVYLYYVTSWVEGGKVYTLPDIYKLDNSIPKTSISWNKVKNVI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaattaaattattaccattgatgatggctctttctagcgtagcaattgctgaa
acatcatcacaaacaaatatgtctgcggagcaaacatccactgcggttgttaatgtaccg
actgtaccacaaacagcgcctgtttctcagccgattcacgatggtgttttacctcaactt
agttttgaagctcaacaagctagagctgcagagttatcaaaacgagcagactatgcttat
gagcaagagcaaattcgtcaagaacaagctcgaaaattagctgctgcggagcaaaaagta
aaacaaacagtaggtaataatgatttattattaagttcaaccacatcaaaagtttattta
gacaatgatttttcgccaatgtggaatgataagtcagctactcgtcaatttttaaaagaa
tatgctgcgtttgcagcaagtggtgtttcgcctaaatcagcaaaagcattacagcaaatc
ttaaatcaaccagaaggattggcgcgtgatatgttattaacggatagttttttagactat
ctttattacaataaaaatgtatatcgtaatgcaaataactggttatataacttaggatca
tattctcctaaggctccatcgggagagcagattgcgagctgggttaaatctgtaaaaagt
ggtagttcaggtcagtttgttgcgaatttagtaccacgtaaccatatttatcaagaaaca
gtacaacgcttgtttgtaatgtctcctggtgcttcaacatctactaagaaagctactaaa
ggcaaatctaaaaatgtagcagccacacctgttgatgaagtcgcggcaacgggatcaagc
tctttctataaattggcattaaatgctcagcgtttacgtattattccaagttttaataat
ggtatctttgtaaatattccaagctaccaattatactatttccgcgatggtcaattagcg
ttacagtcaaaagtaattgttggacgtgaagatcgccgtacaccggtaatgtatagcaaa
cttagtaatgtagtggtaaatccgccatggaatgtaccaacaagtattttaacaaaagat
atcgtaccaaaattggcaagaaatccagggattgcagatagtttaagttacgaaattttg
gatggtagcggtaataaagtaaatcctcgcagtgtgaattggtcgcagtatttgaatgcg
aaaagtataccttaccgcattcgtcaaaaagcgggtgatgatagtgctttaggacgttat
aaattcaacatgccaagttcagatgcaatttatttacacgatacaccaaatcatggatta
tttagtcgtacagatcgtgctttaagttcgggatgtgtgcgtgtagcaaaatcaagtgaa
ttggcaagcatcttattaaaagaagctggttggtctgccgagaaacagcaaagtgtctta
gcgagtaaaaaaaccacttcagctaatattcgttcagataaccctgtttatctatactac
gtgacctcatgggttgaaggtggcaaggtttatactttaccggatatttataaattagat
aacagtattccaaaaacatcaattagttggaataaagtaaaaaatgtgatctag
DBGET
integrated database retrieval system