Actinobacillus porcitonsillarum: DDU33_06435
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Entry
DDU33_06435 CDS
T05443
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
apor
Actinobacillus porcitonsillarum
Pathway
apor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DDU33_06435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apor03019
]
DDU33_06435
03400 DNA repair and recombination proteins [BR:
apor03400
]
DDU33_06435
Enzymes [BR:
apor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DDU33_06435
Messenger RNA biogenesis [BR:
apor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DDU33_06435
DNA repair and recombination proteins [BR:
apor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DDU33_06435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HEM4
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AWI51137
UniProt:
A0A2U8FJN1
LinkDB
All DBs
Position
complement(1320671..1322485)
Genome browser
AA seq
604 aa
AA seq
DB search
MQQTNSPKAILNNIFGYQQFRQGQQEVIEAVLNGLDTLVIMTTGGGKSLCYQVPALCIEG
LTLVISPLISLMKDQVDQLLTNGIEAGYINSTQTLEEQQLVEQKVISGQLKLLYLSPEKV
MTQGFFHFISHCKISLIAVDEAHCVSQWGHDFRPEYTLLGGLRSTFPNVPMMALTATADP
TTRHDIIHHLRLQDPHTYLGSFDRPNIRYTVQEKFKPMEQLAKFIAKQQGKSGIVYCNSR
KKVEEITEKLSARGVSVMGYHAGMTIQQRETVQNAFQRDNIQVVVATIAFGMGINKSNVR
FVAHFDLPRSIESYYQETGRAGRDDLPSEAILFYDPADYAWLQKVLLEEPESEQRNIKQH
KLQAISAFAESQTCRRLVLLNYFGESKQEPCKNCDICLDPPRKYDGLIDAQKVMSVIYRT
GQTFGMHHVIGVLRGMNNQKIRQFGHDQLSVYGIGKEQSQDYWVSVIRQLIHLGLVRQNI
VNHSALQLTEEARPVLKSQVKLELALPRLGSSSATAFVSKQGSVRYDKDLFARLRFLRKQ
IADNENIPPYVVFNDATLQEMAEFLPLTPAELLEINGVGERKLERFGGAFISLIKEHCEN
RKPQ
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagacaaattcgcctaaagctattttaaataatatttttggttatcagcaattc
agacaagggcaacaagaagtcattgaagccgtactgaatggcttagatacgcttgtcatt
atgacaacaggcggtgggaaatcgctctgctatcaagttcctgcactttgtattgaggga
ctaacgctcgtaatctcgccattaatttctttaatgaaagatcaagtcgatcagcttttg
accaatggtattgaagccggctatatcaattcaacacaaacccttgaagagcaacaactt
gttgaacaaaaggtgatttcagggcaactcaaattactttatctttcgcctgaaaaagtg
atgacacaaggctttttccactttatttcacattgcaaaatcagccttattgccgttgat
gaagcacattgtgtttcccaatggggacacgatttcagaccagaatacaccctacttggt
ggtttgcgcagtacctttccaaatgtgcccatgatggcattaacggcaacggcggatcca
acaactcgccacgatattattcatcatctccgcttacaagatccgcacacttatctaggt
agctttgatcgcccaaatattcgttatacagtacaagaaaaatttaagccgatggagcaa
ttggcaaaatttattgcaaagcaacaagggaaaagcgggattgtatattgcaacagccga
aaaaaagtggaagaaattaccgaaaagctctctgctcggggcgtatccgtgatgggctac
cacgccggaatgactattcagcaacgagaaaccgttcaaaatgctttccaaagggataac
attcaagttgtagttgccactatcgcttttggtatgggaatcaataaatctaacgtgcgg
tttgttgcccattttgacttaccgagaagtattgaatcttactatcaagaaaccgggcga
gcggggcgagatgatctgccctctgaagcgattttattttacgatccagctgattacgct
tggttacaaaaagtcttacttgaagagccggaaagcgagcaacgcaatatcaaacaacat
aaattgcaagcaattagcgcttttgccgaatcgcaaacttgtcgccgtttagtgctactc
aattattttggggagtctaaacaagaaccttgtaaaaactgcgatatttgtttagatccg
ccacgtaaatatgatggtttaattgatgctcaaaaagtaatgtcggtgatttaccgcacc
ggacaaaccttcggtatgcatcacgttatcggcgttttacgtggcatgaataatcaaaaa
atccgccaattcggacacgaccaactctccgtttacggtattggtaaagagcagagccaa
gattattgggtaagcgtgattagacagcttattcatttaggattggtacgccaaaacatt
gttaatcactctgctttacaattaaccgaagaggctcgccctgtcttaaaatcacaagtc
aaattagagctggcattacctcgcttaggctcatcttcggctactgcatttgtgagcaaa
caaggctcggtgcgctatgataaagatctctttgcacggctacggtttctgcgcaagcaa
attgctgataacgaaaatatcccaccttatgtggtctttaatgatgctactttgcaagaa
atggcagaatttctaccgcttacacctgctgaattacttgaaatcaacggtgtgggcgaa
cgcaaactcgaacgttttggcggtgcttttatttctttaataaaagagcattgtgagaat
cgtaagccgcaataa
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