Actinobacillus porcitonsillarum: DDU33_07415
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Entry
DDU33_07415 CDS
T05443
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
apor
Actinobacillus porcitonsillarum
Pathway
apor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DDU33_07415 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apor03019
]
DDU33_07415 (pnp)
03016 Transfer RNA biogenesis [BR:
apor03016
]
DDU33_07415 (pnp)
Enzymes [BR:
apor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DDU33_07415 (pnp)
Messenger RNA biogenesis [BR:
apor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DDU33_07415 (pnp)
Transfer RNA biogenesis [BR:
apor03016
]
Prokaryotic type
tRNA degradation factors
DDU33_07415 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
S1_2
aRib
KH_SLS1_2
OB_RRP5_4th
UPF0181
Motif
Other DBs
NCBI-ProteinID:
AWI51324
UniProt:
A0A2U8FLW3
LinkDB
All DBs
Position
complement(1543051..1545186)
Genome browser
AA seq
711 aa
AA seq
DB search
MTPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVVAKKDVKEGQDFFPLTV
DYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPVRPLFPEGFFNEIQVIATVVSVN
PQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFIDNQFVLNPTMSEQRLSRLDLVVAG
TDKAVLMVESEADILTEEQMLAAVVFGHEQQQVVIENIKEFVKEAGKPRWDWVAPEPNTD
LINKVKALAEARIGDAYRITEKQARYEQIDAIKAEVIATLTAEDETVSEGKIIDIITALE
SQIVRSRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSALFTRGETQALAVATLGTERD
AQIIDELTGEKSDRFLFHYNFPPYSVGETGRIGSPKRREIGHGRLAKRGVLAVMPTAEEF
PYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEEEKFVVLSDI
LGDEDHLGDMDFKVAGTREGVTALQMDIKIEGITPEIMRIALNQAKGARMHILGVMEQAI
PAPRAEISDFAPRIHTMKIDPKKIKDVIGKGGATIRALTEETGTSIDIDDDGTVKIAATD
NNAAKRVMERIEEIVAEVEVNAIYKGKVTRVVDFGAFVSILGSKEGLVHISQITDARVER
VADYLSVGQEVQVKVVEIDRQGRIRLTMKDLNNEATETTEEVQIQEEQAEI
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgactccaatcgtcaaacaatttaaatacggtcagcataccgttacactagaaacaggc
gcaatcgctcgtcaagcgactgctgctgttatggcaagcatggatgatacaactgttttt
gttacagtcgttgcgaaaaaagatgtaaaagaaggtcaagacttcttcccattaaccgta
gattatcaagagcgtacttacgctgccggtcgtattcctggtggttttttcaaacgtgaa
ggtcgtccttctgaaggcgaaactttaattgctcgtttaatcgaccgcccggttcgtcca
cttttccctgaaggtttcttcaacgaaattcaagtgattgcaacagtggtttctgttaac
ccacaaatcagccctgatttagtggcgatgatcggtgcttcagctgcattatctctatct
ggtgtgccttttaatggcccaatcggtgcggctcgtgttggttttattgacaaccaattt
gtccttaacccaaccatgtcagaacagcgtttaagccgtttagatttagtcgttgcaggt
acagacaaagcagtattaatggttgagtctgaagcagacatcttaacggaagaacagatg
ttagctgcggtggtattcggtcacgagcaacaacaagttgtgattgaaaacatcaaagaa
tttgtgaaagaagcgggcaaaccacgttgggattgggttgcaccagagccaaatacagat
ttaatcaataaagttaaagcattagcagaagcacgtatcggcgatgcttaccgtatcaca
gaaaaacaagcacgttacgaacaaatcgacgcaatcaaagccgaagttatcgcaacgtta
acagctgaagatgaaaccgtatctgaaggtaaaatcattgatatcatcacagcattagaa
agccaaatcgtccgtagccgtatcattgcaggcgaaccacgtattgacggtcgtaccgtg
gataccgttcgtgcattagacatttgcacaggagttctaccacgtacgcacggttcagca
ttatttacccgtggcgaaacacaggcgttagcggttgcgacattaggtacagaacgtgat
gcacaaatcattgatgaattaacaggcgaaaaatcagatcgcttcttattccactacaac
ttccctccatattcagtaggtgaaacaggtcgtatcggttcgccgaaacgtcgtgaaatc
ggtcacggtcgtttagcgaaacgtggtgtgttagcagtaatgccaactgcagaagaattc
ccgtatgtagtacgtgtggtatctgaaattaccgaatcaaacggttcttcttcaatggct
tctgtgtgtggtgcttctcttgcgttaatggatgcaggcgtgccaattaaagctgcggtt
gcaggtatcgcaatgggcttagtgaaagaagaagagaaatttgtggtactttcagacatt
ttaggtgatgaagaccacttaggcgatatggactttaaagtagctggaacccgcgaaggt
gtgactgcattacaaatggacatcaaaattgaagggattacccctgaaattatgcgtatc
gcattaaatcaagcgaaaggcgcacgtatgcacattttaggtgtaatggaacaagcaatc
ccagcacctcgtgctgaaatttctgacttcgcacctcgtattcacacaatgaagatcgat
ccgaagaaaatcaaagatgtgatcggtaaaggtggtgcgacaattcgtgcattaactgaa
gaaactggcacatcaatcgacattgatgatgacggcacagtgaaaattgcagcaacagac
aacaatgcagcaaaacgtgtcatggagcgtatcgaagagatcgtggcagaagtcgaagtg
aacgctatctacaaaggtaaagtaacgcgtgtggttgatttcggtgcattcgtttctatc
ttaggcagcaaagaaggactagttcatatttctcaaattactgatgctcgtgttgaacgt
gttgcagattacttatctgttggccaagaagttcaagtaaaagtggtagaaatcgatcgt
caaggtcgcattcgtttaaccatgaaagacttaaataacgaagccacagagacaactgaa
gaagttcaaattcaagaagaacaagctgaaatctaa
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