Actinobacillus porcitonsillarum: DDU33_08510
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Entry
DDU33_08510 CDS
T05443
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
apor
Actinobacillus porcitonsillarum
Brite
KEGG Orthology (KO) [BR:
apor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apor03032
]
DDU33_08510 (topA)
03400 DNA repair and recombination proteins [BR:
apor03400
]
DDU33_08510 (topA)
Enzymes [BR:
apor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DDU33_08510 (topA)
DNA replication proteins [BR:
apor03032
]
Prokaryotic type
DNA Topoisomerases
DDU33_08510 (topA)
DNA repair and recombination proteins [BR:
apor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DDU33_08510 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_bTOP1
Zn_Ribbon_Topo
Toprim
Zn_ribbon_Top1
DUF7351
Zn_ribbon_recom
Zn_ribbon_LysW
Toprim_4
DUF2399
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AWI51519
UniProt:
A0A2U8FKK5
LinkDB
All DBs
Position
complement(1764613..1767213)
Genome browser
AA seq
866 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPKSGTEEKAERAKPTSTKGLTAE
QKAKLKAEKERNALVKRMGIDPYHGWKANYQIMPDKQKVVSELKSLAKKADHIYLATDLD
REGEAIAWHLREVIGGDDNRFSRVVFNEITKNAIQKAFEHPEQLNLDRVNAQQTRRFLDR
VVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQPEEYWEILANTQTKRKKL
PLELTNYQGKKWQAKNEAEAMQAVKNLQQAAFIVSEIDQKPTSSKASPPFITSTLQQTAS
TRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSQDALTMARGYIEKKFGQDYLPAKPNF
YSSKENAQEAHEAIRPSDVNVLMSDLKGMDKDAERLYDLIWRRFLACQMTPAQYDSTSLT
VTASDYEFKAKGRVLRFDGWTKALPIQGKTAEDQELPNVELNEVLTLDELVPSQHFTKPP
ARYSEAALVKELEKRGIGRPSTYAAIISTIQERGYVRTENRRFYAEKMGEIVTDRLNESF
GDLMNYDFTANMEETLDQIAEGNKNWISALDTFFKDFSEQLTKAELDELEGGMKPNSLVP
TEIDCPTCGRKMAIRTASTGVFLGCTGYALPPKERCKTTMNLIPEAELLNVLDDETETKA
LMARKRCPKCDSAMDSYVIDPSRKLHVCGNNPNCDGYVIEAGSFKIKGYDGPIVECDKCG
ADMHLKLGRFGKYMGCTNCDNTRKILKNGEVAPPREEPIPFPELKCENADAYFVLRDSAV
GVFMSAHNFPKVRESRPAKVSELAQYRDRLPEKLQYLADAPLTDPEGNPAIISFSRKEKR
QYVTSEKNGKKTKWIVDYLDGKWVER
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatcattagttattgtggagtcgcccgctaaggcaaaaaccattaacaaatat
ttaggtagcgattatgtcgtcaaatcaagtgtgggtcatattcgtgatttaccaaaaagt
ggtaccgaggaaaaagcggagcgagctaaacctacatcaaccaaaggattgacagctgaa
caaaaagcaaaactcaaggcagaaaaagaaagaaatgcattggtaaaacgtatggggatt
gacccttaccacggctggaaggctaattaccaaattatgccggataaacaaaaagtggta
tcagaactgaaatcgttagccaaaaaggcagaccatatctatcttgcaaccgacttggat
agagaaggggaggctattgcgtggcatttacgtgaagtgattgggggagatgataatcgc
ttcagccgtgttgtgtttaatgagatcacgaaaaatgctattcaaaaagcatttgaacat
ccggaacaattaaacttagaccgtgttaatgctcaacaaactcgccgctttttagatcgt
gtggtgggttttatggtttcaccgttactttggaagaaagtggcaagagggctttctgcc
ggtcgagtacaatcggttgccgttaaattattggtcgagcgtgaacgagaaattaaggct
ttccaaccggaagaatattgggaaattttagcgaatacgcaaacaaaacgtaaaaaacta
ccgcttgaattaaccaattaccaaggtaaaaaatggcaagcaaaaaatgaagcagaagca
atgcaagcggtcaaaaacttgcaacaagctgcatttattgtgagtgaaattgatcaaaaa
ccaacaagctcaaaagccagtccaccttttattacatctacattacaacaaaccgcaagc
actcgcttgggatttggcgtgaagaagacaatgatgttggcacagcgtttatatgaagcc
ggttacatcacttatatgcgtaccgactcaacgaatttaagccaagatgccttgacaatg
gctcgaggttatattgagaaaaaatttggtcaagactatttaccggctaaaccgaatttt
tattcaagtaaagaaaatgcccaagaagcgcacgaggcaatccgtccttctgatgtgaat
gtgttgatgtctgatcttaaaggtatggataaagatgcggagcgtttatatgatttaatt
tggcgccgtttcttagcttgtcaaatgacgccggcacaatatgattcaaccagtttaacg
gttacggcaagtgattatgaattcaaagcgaaaggccgcgttttacgttttgatggttgg
acgaaagcattacctattcaaggtaaaacggcagaagatcaggaattacctaatgtggaa
ttaaatgaggttctgacactcgatgagctcgttccaagccaacattttaccaaaccaccg
gctcgttattctgaagcagctctcgtaaaagagttggaaaaacgtggtattggccgccct
tcaacttatgcggcgattatttcaaccattcaggagcgtggttatgttcgtaccgaaaac
cgccgtttctatgctgagaaaatgggtgagatcgttacagatcgattaaatgagtccttt
ggggatttaatgaactacgattttaccgctaatatggaagaaaccttagaccaaattgcg
gaagggaataaaaactggatttcggcgcttgataccttctttaaagatttctcagaacaa
ttaacaaaagcggaattagatgaacttgaaggcggaatgaagccaaacagccttgtgcca
acggagattgattgcccgacttgcggacgtaaaatggcaattcgcaccgcttcaacaggg
gtattcttaggttgtaccggctacgcattgccaccaaaagagcgttgtaaaacaacaatg
aatttaattccggaagctgaattactcaatgtgctggacgatgaaacagaaacgaaagcg
ttaatggctcgtaaacgttgcccgaaatgtgattcggcgatggatagctatgtgatcgac
ccaagtagaaaattacatgtttgtggtaataatccaaattgtgatggttatgttatcgaa
gccggtagttttaaaattaaaggttatgatggcccaattgtcgaatgtgataaatgtggt
gcagatatgcacttaaaattaggccgttttggcaaatatatgggctgcacgaattgtgat
aatacccgtaaaattctgaaaaatggcgaagttgcgccaccacgtgaagagccaattcca
tttcctgaattgaaatgtgaaaatgcggatgcttattttgttttacgtgatagtgcggtt
ggcgtgtttatgtcagcgcataatttcccgaaagtgagagaaagccgtccggcgaaagta
tcggaattagcgcaatatcgtgatcggttaccggaaaaattacagtatttagccgatgcg
ccattaaccgaccctgaaggtaatccagccattattagttttagtcgtaaagagaaacgt
caatacgtaacgtcagagaaaaacggcaaaaaaaccaaatggattgtagattatcttgat
gggaaatgggtagaacgttaa
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