Actinobacillus porcitonsillarum: DDU33_10030
Help
Entry
DDU33_10030 CDS
T05443
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
apor
Actinobacillus porcitonsillarum
Brite
KEGG Orthology (KO) [BR:
apor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apor03021
]
DDU33_10030
Transcription machinery [BR:
apor03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
DDU33_10030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_22
Trypco1
YpjP
GBR2_CC
Motif
Other DBs
NCBI-ProteinID:
AWI51798
UniProt:
A0A2U8FLF7
LinkDB
All DBs
Position
complement(2084387..2087296)
Genome browser
AA seq
969 aa
AA seq
DB search
MFVVGQRWISESENNLGLGIVSAVDNRAITIQFPAAEEERIYAIAVAPLTRVQFQVGDVI
NASEGWQMEVSQVIENQGVILYLGKRLDTQEEVVLPEMGLDHKVSFSRPQDRLFSAQIDR
SDRFALRYHALKHQQAQFQSPLRGLRGVRAGLIPHQLHIAKEVGQRLSPRVLLADEVGLG
KTIEAGMILQQQLFAGRAERVLILVPETLQHQWLVEMLRRFNLKFSLFDEERCSDFDQAD
ADGHDISENPFDTESMVIASIDWLSAKPHRAEQVKACQWDMLIVDEAHHLAWSEEAPSVA
YQLVECLAKQIPSVLLLTATPEQLGQASHFARLALLDSDRFYDYRAFVEEQNAYQPVADA
VATLLSDKPLSANAQNAISELLSEEDTEPMFKIINSEKSSESDRLQVRQELIQELIDRHG
TSRVLFRNTRQGVKGFPHREYHQVKLAMPAQYTNALKVMKMMGGIKQSDLLYPEQLFQRL
NPTARWVEFDPRISWLITFLKNHRDEKVLVICKQAETAIALEQILREKEAIRAAVFHERM
SIVERDKASAYFAQQEEGAQVLISSSIGSEGRNFQFASDLVLFNLPDHPDVLEQSIGRLD
RIGQKNDIKIYVPCFEDSAQIVLAEWYHKGLNAFEETCPMGATLFDEYHEALQGYLDDPQ
ADGFDEFLTKVNQRQKVLKTALEKGRDRLLELNSNGGEAAQQLAAAIAEQDNQPQLVNFA
LNLFDVIGLEQEDLGEQSIVISPTGHMLVPDFPGLAEEGSTVTFNRQLALMREDVEFLTW
DHPMIRHGIDLITSGDIGKSAVSLLVNKNLPAGTLLLEAIYIVETQAPKGLNLTRFLPPT
PIRILLDNKGNDMAAQVSFAGLEKQLKPVNKQMANKIAKMARTNIEKMIGISEQKVVAQA
EAIIAEAKAEANSKLKAELHRLEALKSVNKNIRADEITALEKQLNETLTQLDLATWRLDC
LRVIVSNQS
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgttcgttgtaggtcagcgttggataagtgaatctgaaaataacttgggattagggatt
gtttctgcggtggataatcgtgccattacgattcaattcccggcagcggaggaggaacgc
atttatgcgattgccgttgcgccactcactcgagtgcaatttcaagtgggcgatgttatc
aacgcatcagaaggttggcaaatggaggttagccaagtcattgaaaatcagggggtgatt
ttatatttgggtaaacgtttagatactcaagaagaagtggtattgcccgaaatggggctt
gatcataaagtgagttttagccgtcctcaagatcgtttgttttccgcacaaattgaccgt
tcagatcggtttgcgttacgttatcatgcgctaaaacaccaacaagcgcagtttcagtcg
cctttgcgtgggctgcgtggggtaagagccgggcttattcctcatcaattgcatatcgcc
aaagaggtggggcagcgtttgtcgcctcgagtgttactggcagatgaagtggggctgggt
aaaaccattgaagccggtatgattttacagcaacaattgtttgccggccgtgcagagcgt
gtgttgattttagtgcctgaaaccttgcaacatcagtggctggtggaaatgctccgccgt
tttaacttgaaattctcgttatttgatgaagagcgttgtagcgattttgatcaggcggat
gcagatggtcatgatatcagcgagaacccgttcgatacggaatcaatggtcattgcttcg
attgattggttgtcggcgaaacctcatcgtgcggagcaggttaaagcgtgccaatgggat
atgctgattgttgatgaagcacatcatttggcctggtcggaagaggctccttcggtggct
tatcaattggttgagtgtttagccaaacaaattccttcagtattacttttaaccgcaacg
ccggaacaattagggcaagcaagccattttgcacgtttagccttattggattcagatcgc
ttttatgactatcgtgcctttgttgaagagcagaatgcttatcagccggtggcggatgca
gttgcaaccttgttaagcgataagccattgagtgcgaatgcgcaaaatgcgatttcggag
ctattgagtgaagaagataccgagccgatgtttaaaatcatcaatagcgaaaaatcttca
gaatctgaccgcttgcaagttcgccaagagttgattcaagagttgattgatcgtcatggt
accagccgagtgttgttccgcaatactcgccaaggggtaaaaggcttcccacaccgtgaa
tatcatcaggtcaaattggcgatgccggcacaatatacgaatgcgttaaaagtgatgaaa
atgatgggcggcattaagcaaagtgatctgctttatccggaacaactttttcagcgttta
aatcctacggcacgttgggtggaatttgatcctcgtattagctggttaatcactttcttg
aaaaatcatcgtgatgagaaggtgttagtgatttgcaaacaggcagaaacagcgattgcg
cttgagcagatcttacgtgaaaaagaggcgattcgtgcggcagtgttccacgagcgtatg
tcgattgttgaacgagataaggcttccgcctattttgcccaacaagaagagggtgcgcag
gttctcattagttcaagcattggttcggaaggacgaaatttccaatttgccagcgattta
gtgttatttaatcttccggatcatcctgatgtgttagaacaaagcattggacgcttggat
cgtattggacagaaaaacgatattaaaatttatgtgccttgttttgaagattctgcgcaa
attgtgttggcagagtggtatcacaaaggcttaaatgcttttgaagagacctgtccgatg
ggggcgacactctttgatgagtatcatgaggcgttgcaaggctatttagatgatccacaa
gcggacggatttgatgaatttcttactaaagtaaatcaacgtcaaaaggtattaaaaacg
gcgcttgaaaaagggcgagatcgcttattagagcttaactctaatggcggagaagccgct
caacaactagcagctgcgatagccgaacaagataaccaacctcaattagtgaattttgct
ttaaatctttttgatgtaattggtttagagcaagaggatttaggcgagcaaagtattgtg
attagcccaacaggacacatgctcgtgccggatttcccagggcttgcggaagaaggtagt
acagtaacgtttaatcgccaattagccttaatgcgtgaggatgtggaatttttaacttgg
gatcacccaatgattcgtcatggtattgatttaatcacatcgggcgatattggaaaatcg
gcggtatcgctgttagtgaataaaaatttacccgcaggtacgttgctacttgaggcgatt
tacattgtggaaacacaagcaccgaaagggcttaatttgactcgtttcttaccgcctacg
ccaattcgtattttattggataataaaggcaacgatatggctgctcaggtctcttttgcc
ggtttagaaaagcaattgaaaccagtgaataagcagatggcaaataaaattgcaaaaatg
gcacgcacaaacatcgagaagatgattggcatcagtgagcagaaagtggtagcacaagcg
gaagcgatcattgctgaagcaaaagcagaagcgaatagcaaattaaaagctgaattacac
cgcttagaagcgttaaaatcggtgaataaaaacattcgagcagatgagattacagcgtta
gagaaacagcttaacgagacactcacgcaattagatcttgccacttggcgacttgattgt
ttacgtgtcattgtgagcaatcaaagttag
DBGET
integrated database retrieval system
