Acinetobacter portensis: MZO21_04220
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Entry
MZO21_04220 CDS
T08876
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
apot
Acinetobacter portensis
Pathway
apot03030
DNA replication
apot03430
Mismatch repair
apot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MZO21_04220 (dnaQ)
03430 Mismatch repair
MZO21_04220 (dnaQ)
03440 Homologous recombination
MZO21_04220 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apot03032
]
MZO21_04220 (dnaQ)
03400 DNA repair and recombination proteins [BR:
apot03400
]
MZO21_04220 (dnaQ)
Enzymes [BR:
apot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MZO21_04220 (dnaQ)
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
MZO21_04220 (dnaQ)
DNA replication proteins [BR:
apot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MZO21_04220 (dnaQ)
RNase H
MZO21_04220 (dnaQ)
DNA repair and recombination proteins [BR:
apot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MZO21_04220 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
RVT_3
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UPO24030
LinkDB
All DBs
Position
complement(830512..831867)
Genome browser
AA seq
451 aa
AA seq
DB search
MSQSITLYVDGACRGNPGLGGWGAYIIEGNEERKICGGEEHTTNNRMELTAAIEGIKACP
SSAKLIIWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWKELDATCQGREIEWNWIKGHA
GHAGNEMADQLANQGADETEKKLNNPMQDKKKAENDWLLDDPFGFDLAEDDSEETEEIIE
DAPLELEAEIADEAEESIVENKPNTQSHPHIVITPATIEAHGPRQLILDTETTGFYFQDT
DRIIEVGAIEMINRKLTGSSIHIYINPEKEVGESENIHGISDEFLKDKPKYAEIADVLFD
YLKGAEIIAHNATFDMNFLNMEFERVGLGKLSAVCEVTDTLAMAKNKHPGQKNSLDALVR
RYEIPARDRTFHGALLDAEILSDVYLAMTGGQVSFDIDALSNTEVLEGESTRRDVDIQLA
AILPSEEELSAHENWVKEFEEKHGEPCLFAK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatcaatcacactttacgtagatggcgcgtgtcgtggcaatcctggcttaggt
ggttggggagcatatattattgaaggcaatgaagagcgtaaaatttgtggtggcgaagaa
catacaacaaacaaccgcatggaacttactgcggcaattgaaggtattaaagcttgccca
agcagtgccaaattaattatttggacagattctaactatgtaaaacaaggtattacagag
tggattcatggttggaaaaagaaaaactggaaagatgttaaaaacccagatttatggaaa
gaacttgatgcaacatgccaagggcgtgaaattgagtggaattggattaaaggtcacgca
ggtcatgcaggaaatgaaatggcagatcaacttgcaaaccaaggcgcagatgaaactgaa
aagaagctgaataatcctatgcaagataaaaaaaaagctgaaaatgactggcttctagat
gatccctttgggttcgatttagccgaagatgattcagaagagactgaagaaataattgaa
gatgctccgcttgagcttgaagctgaaatagccgatgaagctgaagaatcaattgtagaa
aataaaccgaatacacaaagccatccacatattgtgattacacctgcaacaatagaagca
catggccctcgccaacttattctagatacagaaaccacaggtttttacttccaagataca
gaccgtattattgaagttggtgcaattgaaatgattaaccgtaaacttacgggcagttca
attcacatttatattaatcctgaaaaagaagttggcgaatctgaaaatattcacggtatt
tcagatgagtttttaaaagataaacccaaatatgcagaaattgcagatgttttatttgat
tacctaaagggtgcagaaattattgcccataacgcaacgttcgatatgaacttcttaaat
atggagtttgagcgtgttggtctaggtaagctttctgccgtgtgcgaagttaccgatact
ttagccatggcgaaaaataagcatcctgggcagaaaaattcgcttgatgctttagttcgt
cggtatgagattcctgcacgtgatcgtaccttccacggtgcattactcgatgctgaaatt
ctgtctgatgtttatttagcaatgacaggtgggcaagtatcttttgatattgatgccctc
tctaacactgaagttttagaaggcgaatcgacacgtcgtgatgttgatattcaattggct
gcgatattaccttcagaagaagaattatccgcacatgagaattgggtcaaagaatttgaa
gaaaaacatggcgagccttgcctttttgccaaataa
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