Acinetobacter portensis: MZO21_04960
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Entry
MZO21_04960 CDS
T08876
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
apot
Acinetobacter portensis
Brite
KEGG Orthology (KO) [BR:
apot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apot03021
]
MZO21_04960 (rapA)
Transcription machinery [BR:
apot03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
MZO21_04960 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_22
AAA_34
Motif
Other DBs
NCBI-ProteinID:
UPO24160
UniProt:
A0ABY4JXI5
LinkDB
All DBs
Position
979794..982622
Genome browser
AA seq
942 aa
AA seq
DB search
MQQFAIGQRWLSDTETELGLGVLIDVDERSVSILFPKSDETRVYARSNAPLTRIIFNTKD
ELMDQEGTTWIVESFEDRNGVIRYDVIRTLEDGTEERKSLNETRIGATIQLSKPLDRLLA
SQIDYKEWYDLRIESLLMQANMKSSPLRGMIGSRVGLIPHQLYIAHEVGQRFAPRVLLAD
EVGLGKTIEAGLIIHQQLKTGRSERILILVPDSLQYQWMIEMRRRFNLQFSLFDLTRTAS
IKEHDPDLNPFLTEQCIIASVDLMIDHDDLREQAMEAGFDLLVVDEAHHLMWSEEDGGND
RYDLVEELAQQTAGVLLLTATPEQLGVESHFARLRLLDSQRFSSLDRFLDEEEQYQQTAK
IAEVLMSDLPLEEAHLAAIEGLLGHRIEDHPEQRFRAIHELLDRHGTGRILFRNTREAIQ
GFPGRDCQPAPLPAPENWSKEGKLREQMWPEEAQLDGAWMETDPRVSWIMEMLRTQLKHK
KVLLIARSGPVVEALENALRIHAGIRTAMFHEGMSLLERDQAAAYFAEDSYGAQILLCSE
IGSEGRNFQFASDLILFDLPANPDVLEQRIGRLDRIGQENRIQIHVPYLVGTAQERMFRW
YNEALNIFGNISPTAQTLQENFIVDLKDCLLTDMGQKFEELLEAVVVQREALEAELQNGR
DRLLEYNSCRPIVAQEIVQALEDYDDNTTLPMFMKRFMASTNIDFDEQSNGTVIIKPTDQ
MQVQGLTLDEEGMTATFYRDQAQIREDAEYLTLEHPFTESVMEMIGTQGFGSTNVAVLKS
AALPQGSVLLEVWFKVDVVAPKALNLPSSLPQQLVRVLLSEKGQDLSQKIAPEILKPYIH
HLDGNSCRQVVKARRDIIEARYAQALDIAKAALPNFKEQAKEVYGNKWQYEIDRLTYLKQ
FNPSIREDEIARLQKFQKEGISLLDGLAVTPEAIQVMVVVKP
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
ttgcagcagtttgctattggtcaacgttggctttcagacacagaaacagaacttggttta
ggagttctcattgatgtagatgagcgatcggtcagcattttattccccaaaagtgatgaa
actcgtgtctatgcacgaagcaatgcacctttaacccgtattatctttaatactaaagat
gaattaatggatcaagaaggtacaacgtggattgttgagtcttttgaagatcgcaatggc
gttattcgttacgatgttattcgtactcttgaagatggtacggaagagcgtaaatcttta
aatgaaacccgtattggcgcaacaattcagttatctaaaccgctagatcgtttacttgca
agtcaaattgattataaagaatggtatgacttgcgtattgaatctttgcttatgcaagcg
aatatgaaatctagtccattacgtggcatgattggttcgcgtgtgggtttaattccgcat
cagctttatattgcacacgaagtaggtcagcgttttgcaccacgtgttttacttgccgat
gaagtaggtttaggtaaaaccattgaagcaggtttaatcattcatcaacaactaaaaacg
ggtcgttctgaacgtatcctaattttagtgccagattcactgcaatatcagtggatgatt
gaaatgcgtcgtcgttttaatcttcaattttcattgttcgatttaacacgtactgcgtct
attaaagaacatgatccagatttaaacccattcttgacagaacaatgcatcatcgcaagt
gtcgatttaatgattgaccatgatgatttacgtgaacaagcaatggaagcaggttttgat
cttcttgttgtcgatgaagcgcatcatttaatgtggagcgaagaagatggcggaaacgat
cgttatgacttggttgaagaactagcacaacaaactgcgggtgtattgttactcacagca
acccctgaacagcttggtgtagaaagtcattttgcccgtttacgtttactcgactcgcaa
cgttttagttctttagatcgtttcttagatgaagaagagcaatatcaacaaacagctaaa
attgctgaagtgttgatgtctgatttgcctttagaagaagcacatttagctgcaattgag
ggcttattaggtcatcgtattgaagatcatcctgaacagcgtttccgtgcaattcacgaa
ttattagaccgtcatggtacgggtcgtattttgttccgtaacacacgtgaagcaattcaa
ggtttccctggccgtgattgtcagccagcacctttaccagcaccagaaaattggtctaaa
gaaggtaaactacgtgaacagatgtggcctgaagaagcacaattagacggtgcttggatg
gaaacagatccacgtgtttcgtggattatggaaatgcttcgtacgcagttaaaacacaaa
aaagtgttattaattgcacgtagtggtccagttgttgaagctttagaaaatgcacttcgt
attcatgcaggtattcgtaccgcaatgttccatgaaggtatgagcttacttgagcgtgac
caagctgcagcttattttgctgaagactcttatggcgcacaaattttattatgttcggaa
attggttcagaaggtcgtaacttccaatttgcatctgacttaattttatttgatttacct
gcaaacccagatgtacttgaacaacgtattggtcgtttagaccgtattggtcaagaaaac
cgtattcaaattcatgtgccttatttggttggtactgcacaagaacgtatgttccgttgg
tacaacgaagctttaaatatttttggtaatatttcgcctacagcgcaaactttacaagaa
aactttattgtagatttaaaagactgtttgcttacagatatggggcaaaagtttgaagag
ttacttgaagcggttgttgttcagcgtgaagctttagaagcagagcttcaaaatggtcgt
gaccgtttgcttgagtacaactcttgccgacctattgtggcgcaagaaattgttcaagca
cttgaagattatgatgacaacacgactttgccaatgtttatgaagcgctttatggcatcc
acaaacatcgactttgatgagcaaagtaacggtactgttattataaaaccaacagaccaa
atgcaagttcaaggtttaacacttgatgaagaaggtatgacggctacgttctaccgagat
caagcgcaaattcgtgaagatgctgaatatttaacgctagaacatccatttacagaaagc
gtaatggaaatgattggcacgcaaggttttggtagcacaaatgttgctgtacttaaatct
gcggctttaccacaaggttctgtacttcttgaagtatggtttaaggtagatgttgttgca
ccaaaagcattgaatttgccatctagcttaccgcaacaattagtacgtgtattattaagt
gaaaaaggtcaggatttatctcaaaaaattgcacctgaaattttaaaaccttatattcat
cacttagatggtaatagctgtcgtcaggttgtaaaagcacgtcgtgatattattgaagcg
cgttatgcacaagctttagatattgcaaaagcagctttaccaaacttcaaagaacaagcg
aaagaagtgtatggtaataagtggcaatatgaaattgaccgtttaacttacttaaaacaa
tttaatccaagcattcgtgaagatgaaattgcacgcctacaaaaattccaaaaagaagga
attagtttgttagatggattggctgtaacaccagaagcaattcaggtgatggttgttgtg
aaaccataa
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