Acinetobacter portensis: MZO21_05480
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Entry
MZO21_05480 CDS
T08876
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
apot
Acinetobacter portensis
Pathway
apot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MZO21_05480 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apot03019
]
MZO21_05480 (rhlB)
Enzymes [BR:
apot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MZO21_05480 (rhlB)
Messenger RNA biogenesis [BR:
apot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MZO21_05480 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrA_inter
Glyoxalase
Utp25_C
Cas3-like_C_2
Toprim
DUF6914
Motif
Other DBs
NCBI-ProteinID:
UPO24259
UniProt:
A0ABY4JYT1
LinkDB
All DBs
Position
1095784..1096935
Genome browser
AA seq
383 aa
AA seq
DB search
MSAGFETLNLHPNLKKAIDALGFTKMTSIQEKVLKFTLAGHDAIGRAQTGTGKTAAFLVS
VINDLLNNPIKEQRFRGETRALILAPTRELALQIESDAKELTKFTDLHLVTLLGGVDFDK
QKAELSKNFVDIIVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRY
SPRKEQRQTLMFSATFSYDVLNLAQQWLFEPVTVEIEPEKKTNADVEQRVYMVAKTDKYK
LLEEILRDEPIEKVMIFANRRDQVRKLYDHLKRDGYKVVMLSGEIAQDKRLKMLDQFKNG
QHNIMIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGTRGVSISFLSEDDA
FYLPEIEKAIGQKLPLTRLDGYC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctggttttgaaaccttaaatttacatccaaatttgaaaaaagcaattgatgcg
ttaggcttcactaaaatgacatcaattcaagaaaaggttttaaaatttactttggcggga
cacgatgcaattggtcgcgcgcagacaggtacaggtaaaactgcggcctttcttgttagt
gtaattaatgacttattaaataacccgattaaagaacagcgtttccgtggtgaaactcgt
gcacttattttagcgcctacgcgtgagttggcattgcaaattgaaagtgatgcaaaagaa
cttactaagtttacagatctacatttagttactttgttaggtggtgtagattttgacaag
caaaaagctgaactgagcaaaaactttgtcgatattattgtagcaacgccaggtcgttta
attgactttgtagagcaaaaagaagtttggttagatcaaattgaatttttagtgattgac
gaagcagaccgtttactggatatgggttttattccttcagtaaaacgtattgttcgctat
tcaccacgtaaagaacagcgtcaaaccctcatgttctctgcaacatttagctacgatgtt
ttaaatcttgcacaacaatggctatttgaacccgttactgttgaaattgaacctgaaaag
aaaaccaatgcagacgtagaacaacgtgtgtatatggtggctaaaactgacaaatacaaa
ttgttagaagaaattttacgtgatgaaccgattgaaaaggtgatgatttttgcgaatcgc
cgtgatcaagtacgtaagctatatgatcatcttaaacgtgatggttataaagttgtgatg
ttgtcgggtgaaattgcacaagacaagcgtttgaaaatgttagatcaatttaaaaatggt
caacacaatattatgattgcaactgacgttgcgggtcgtggtattcatgtagatggcgtg
tctcatgttgtgaatttcactttacctgagcagtcggatgattatgttcaccgtattggt
cgtacaggtcgtgcgggaacacgtggtgtgagtatcagtttcttatctgaagatgatgcg
ttctacttaccagaaattgaaaaagcgattggacaaaaattaccacttacgcgtttagat
ggttattgctaa
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