Acinetobacter portensis: MZO21_05595
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Entry
MZO21_05595 CDS
T08876
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
apot
Acinetobacter portensis
Pathway
apot03030
DNA replication
apot03430
Mismatch repair
apot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MZO21_05595 (dnaE)
03430 Mismatch repair
MZO21_05595 (dnaE)
03440 Homologous recombination
MZO21_05595 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apot03032
]
MZO21_05595 (dnaE)
03400 DNA repair and recombination proteins [BR:
apot03400
]
MZO21_05595 (dnaE)
Enzymes [BR:
apot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MZO21_05595 (dnaE)
DNA replication proteins [BR:
apot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MZO21_05595 (dnaE)
DNA repair and recombination proteins [BR:
apot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MZO21_05595 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UPO24280
LinkDB
All DBs
Position
complement(1120401..1123970)
Genome browser
AA seq
1189 aa
AA seq
DB search
MHFVHLGIQTEFSITESIVRIPELVKAAADDNMPALAITDLSNLHAAVKFYGKCLGKGIK
PILGSILRLNDAEHRITLLSMTNKGWRNLTELVSEGYISGQQLDIPCVRKELILEQNQDL
ILLLGMHSDVGKMLCTSNPQKAEPLLEEWVEKFGNRVYFALTRTNHPGEEDFIHEAVKLA
KKYNIGVVAHNDVHFIKSEDYEAHEARVCIADGYVLGDSRRPKNYTPEQYFKTSEQMVEL
FSDIPSAIENTYYIAQRCNATLRLGFNDLPDYPIPEGHTIDTYFAHLCEEGLEERLDFLY
PIEKRDDDWAEVRKPYDERLAFEIKIILDMGFPGYFLIVMDFIQWSKGNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDVDFCIAGRDRVIDYVARTYGRE
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMIPTKPLGLSLEESIEAEPQLKDI
VTNPSNPDYDDASEIWEMALKLEGITRNTGKHAGGVVIAPTKLTDYSAVMCDADGTSRVA
QFDKDDVEAAGLVKFDFLGLRNLTVIEDAIKHINAREDVTEPVNISYIPLDDKPAYEIFA
KANTTAVFQFESVGMKKMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGEFEYL
HPLLEKVLEPTYGIMVYQEQVMQAAQFCAGYSLGGADLLRRAMGKKKPEEMVKQRQIFIK
GAAEKDIDEATANHIFDYMEKFAGYGFNKSHAAAYALVAYQTAWLKAHYPAEFMSAVLTS
EMQNTDSIVFLIDDCRINKLEVLPPSINMSIYQFHASSPSTIVYGLGAIKGVGEAAMQSV
IDSRIQDGPYKDLFDFCHRVDLKKINKRTLEALIRSGALDCLGIERSSLMAQLPEAVQAA
EQARSNRETGIMDLFGEVEEVQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPIDVYKVE
LKSFVSNKINELTPTRRGVTTVFAGLVVDIANFPNRMMVTLDDGTARIEISANHERFQRF
KDVIVNEKVVVIEGEIYEREGFDRPMGRLTKAFNLNEIRQKRANSIQIKLAPEHFSKTLN
KDLQEILLPYCNVDMHTHIPVQLKLDFEYATTELHLGINWKVAPLDELLSKLRDYFGADA
LHIEYQVKSKAAKAVSYEAAQPVQVAPPPEGVSMDDAMDQFQAQAEQYS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcactttgtacatcttggtattcaaacagaattttcaattacggaatctattgttcgt
atacctgaacttgtgaaagctgcagcagatgacaacatgcctgcacttgccattacagac
ttatctaacttacacgcagctgtaaaattctatggaaagtgtttaggcaaaggtattaaa
cctattttaggttcaattttacgcctgaatgatgcagaacatcgtattaccctgctgtct
atgaccaacaaaggttggcgtaatcttaccgaactcgtatctgaaggttatatttcaggt
cagcaacttgatatcccttgtgtaagaaaagaattaatattagaacaaaaccaagacctc
attttactgcttggtatgcacagcgacgttggtaaaatgctgtgcacttctaatcctcaa
aaagcggaaccactcttagaagaatgggttgagaaatttggcaatcgtgtttactttgca
cttacacgtaccaatcatcctggtgaagaagattttattcacgaagcggtaaaacttgct
aaaaaatacaatattggtgttgttgcacacaatgatgttcactttattaaaagtgaagac
tatgaagcacatgaagcacgtgtttgtattgcagatggttatgttttaggtgatagtcgc
cgtccaaaaaactatacgcctgaacaatatttcaaaacatctgaacaaatggttgagctg
ttttcagatatcccttcagcaattgaaaatacttactatattgcacagcgttgtaatgca
acgcttcgtttaggctttaatgacctacctgattatccaattcctgaaggtcataccatt
gacacttactttgcacacttgtgtgaagaaggcttagaagaacgcctagatttcctttat
ccaattgaaaagcgtgatgatgattgggcagaagttcgtaagccttacgatgaacgctta
gcctttgaaattaaaattattctagatatgggtttcccgggttacttcctcattgtcatg
gacttcattcaatggtctaaaggcaatggcgtacctgtaggtccgggacgtggttcaggt
gcaggctcacttgttgcttatagcttaaaaattaccgatcttgatccattacgttacgac
ctacttttcgaacgtttcttaaacccagaacgtgtatctatgcccgatttcgacgtcgat
ttctgtatcgctggtcgtgaccgtgtaattgactatgttgcgcgtacttatggtcgcgaa
gctgtatctcaaattgcaacgttcggtaccatggccgccaaaggtgcaattcgtgacgtt
gcgcgtgtattgggtaaatcttatggtttagctgatcgtatttcaaaaatgattccaacc
aaacctttaggtttgagtttagaagaatcaattgaagcagaaccacaacttaaagatatt
gtaaccaacccttccaacccagactacgatgatgcatctgaaatttgggaaatggcacta
aagcttgaagggattacacgtaacacaggtaaacatgcgggtggtgttgtaattgcacca
accaaactcaccgattattcggctgttatgtgtgatgcagatggcacatcacgtgttgca
cagttcgataaagatgacgtagaagccgcaggcttagtgaagttcgacttcttgggttta
cgtaacttaaccgtaattgaagatgcgattaagcacattaatgcacgtgaagatgttacc
gaacctgtcaatatttcatatattccattagacgataaacctgcatacgaaatttttgca
aaggcaaataccacagcagtattccagtttgaatccgtgggcatgaaaaaaatgcttaag
gaagcacgcccaagtaaattcgaagaaattatcgcctttgtgtcgttataccgtccaggt
ccaatggatcttattccagactttatccatcgtatgcatggtggcgagtttgaatattta
catccattactcgaaaaagtactcgaaccaacttacggaattatggtttaccaagaacag
gtaatgcaggcagcgcagttctgtgcaggctatagcttgggtggtgcagacttacttcgt
cgtgcaatgggtaagaagaaacctgaagaaatggtgaaacagcgccaaatctttattaaa
ggtgctgccgaaaaagacattgatgaagcaacagccaaccatattttcgactatatggaa
aaattcgccggctatggttttaacaaatcacatgctgctgcttatgcccttgttgcttat
caaacagcttggttaaaagcgcattatcctgctgaattcatgtctgccgttttaacttcg
gaaatgcagaatacagacagcatcgtattcttaattgatgactgtcgtattaacaagcta
gaagtacttccaccttctatcaatatgtctatttaccaattccacgcaagtagcccatcg
acaattgtttatggtttaggtgcaattaaaggtgttggcgaagctgcaatgcagtctgtt
attgactcacgcattcaagatggtccttacaaagatttattcgatttctgccatcgtgta
gatttgaaaaaaatcaataaacgtactttagaagcgctgattcgttcaggcgcactcgat
tgtttaggcattgaacgttcaagtttaatggctcaacttcctgaagcagttcaagcagcc
gaacaagctcgctcaaaccgtgaaacaggtattatggatttatttggtgaagttgaagaa
gttcaacgtaaaccagctaaacctgtaaaaccttggtcagatgaagttcgcttaaaaggt
gaaaaagatactttaggtttatatttaacgggacatccaattgatgtttataaagtagaa
cttaaatcttttgtatcaaataaaattaatgaattaacaccaacacgtcgtggcgtaacc
actgtatttgcaggtttagttgtagatattgccaacttccctaaccgcatgatggttact
ttagatgacggcacagcgcgtattgaaatttctgccaatcacgaacgtttccaacgtttt
aaagatgtgattgtgaatgaaaaagttgtggttattgaaggtgaaatttacgagcgtgaa
ggctttgatcgcccaatgggacgtttaaccaaagcatttaacctcaatgaaattcgtcaa
aaacgcgcaaacagcattcaaattaaactcgcacctgaacatttcagcaaaacattaaat
aaagatttacaagaaatacttcttccttactgcaatgtagatatgcatacccatattcca
gttcaattaaaactcgactttgaatatgcaacaacagaattacatttaggaattaactgg
aaagttgctcctttagatgaattactcagtaagttacgtgattattttggtgccgatgcc
ttacacatcgaatatcaagtaaagtcaaaagcagccaaagccgtaagctatgaggctgca
caacctgttcaagttgcaccacctcctgaaggtgtgtctatggacgatgcaatggatcaa
tttcaggcacaagccgaacaatattcttaa
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