Acinetobacter portensis: MZO21_07965
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Entry
MZO21_07965 CDS
T08876
Name
(GenBank) DUF3418 domain-containing protein
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
apot
Acinetobacter portensis
Brite
KEGG Orthology (KO) [BR:
apot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apot03019
]
MZO21_07965
Enzymes [BR:
apot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MZO21_07965
Messenger RNA biogenesis [BR:
apot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MZO21_07965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
nSTAND3
nSTAND_NTPase5
T2SSE
NACHT
WHD_HA2
PhoH
AAA_30
AAA_25
SLFN-g3_helicase
TsaE
NB-ARC
ResIII
Motif
Other DBs
NCBI-ProteinID:
UPO24509
UniProt:
A0ABY4JYI7
LinkDB
All DBs
Position
complement(1590459..1594379)
Genome browser
AA seq
1306 aa
AA seq
DB search
MVRAKDLHRLNRLRKGKDANEKQHQELLEKSNAKVRERITRIPNIKLNQDLPVTQSADKL
IEAIQKHQVIIVAGETGSGKTTQLPQIAMLAGRGLTGLIGHTQPRRLAARSVSQRIAEEV
GEKLGESISFKVRFNEQGSQDSIVRLMTDGILLAELSHDRFLTKYDTIIIDEAHERSLNI
DFIMGYLKQLLPRRKDLKVIITSATLDVKRFSNYFNGAPIFEVEGRSFPVEVRYRPISEM
SIVGSDDDEFDDFEENLPRAVVAAVEECFQDAKDKGHPEYADTLIFASTEQEIRELQETL
QKFGPRHTEILPLYARLALAEQQKIFNPTGGGRRIIIATNVAETALTVPNIRYVIDSGFA
RISRYNYRSRVQRLPIEAVSQASANQRKGRCGRIAPGVCIRLYSEDDFQGRPEFTEPEIK
RTNLASVILQMQSLGLGTFDDFDFIEPPDHRLVNDGRKLLIELGAMVEKKSFNSKENLPK
FTDEKKSATSSSFGKGGDIKAGDSLTKIGQKMAKMPIDPRLARMILGGAHFGVLNEILII
VAALAVQDPRERPADKQMQADQKHALFREEDSDFLFYIKLWETLVSNREMSENKRRTFAR
NHFLSWLRLREWKKTHEQLVDLAKGLNLSFNEKKANYENLHRALLTGLLSFIANKTDERN
VFMAVRQQKARIFPASALHKTNTPWVMAFEMVETSQVYLRTLAKIEPEWILLAAGDLLKH
HYFEPHWSKKSGVVNAYDQISLFGLIIEPKRQVNYEKVDQEAAHEIFLRDGLTTGNLGIT
PPFLKHNLLKLEEVERVEDKLRRRDLVVDEETIYQFYASKVPPEVASRRTFEDWRATVEP
KNPRYLFVEDDALWLNDRPTTQQFPDFLRNGELRLAATYRFDPSHDQDGATVKIPVQALP
QVDEAIWSWGIPGWRQDLIEALLKALPKDKRRNLVPIPDTARKLMSRVDAMHLNQHIFNF
LAFQLRGDQISEKDFSFERIDEYLLPFIKVIDEKGRVIEQGRDLAELKSRCRTETHSPVK
QLKGEFKTFPESFVFEASQKVTGVIVKQYQALVPSKTFANLEQKDESGVVIQTFNDQFEA
IKKHRDGIVHLIYMQLGDLTRQLKKQISKPLALAYSPLGDKAKLEQMLVYATLQMSIQSL
PVNAEEFQKLVLDVKKNFLTHGQTALSMMSDIYIQWQDIRRKLLVLDDSIFGKNIDDVED
QLDLMMLSNFVYEKSPDVWQEFPRYLKALVQRLERLPNNLTRDNAAIVDVDPWMEKLFKY
KNDVRLKEVYFMVEELRISLFAQPMKTKMPISPTRIQKVWDKLGIS
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggtgagggcaaaagatcttcaccgtttgaatcgattgcgtaaaggtaaagacgccaac
gaaaaacaacatcaagaattattagaaaaatcaaatgcaaaagtacgtgaacgtattaca
cgcattccgaatattaaactcaatcaagatttacctgtaactcaatcggcagacaagctc
attgaagcaattcaaaagcatcaagtgattattgtggcaggtgaaacgggctcgggtaaa
acaacgcaattaccgcaaattgcaatgcttgcaggtcgtggtttaacaggtttaattggc
catacacaaccacgacgtttagctgcgcgtagcgtgtcacaacgtattgcagaagaagta
ggcgaaaaactaggggaatctatttcctttaaagttcgttttaatgagcaaggttcgcag
gactctatcgtacgtttaatgacggatggtattttgcttgcagaattatctcatgatcgc
tttttaacaaagtacgacaccattattattgatgaagcgcatgagcgttcactcaatatc
gactttattatgggctatttaaaacagctcttacctcgtcgtaaagacttaaaagtaatc
attacttctgcaactttggatgtaaaacgttttagtaattactttaatggtgcaccaatt
tttgaagtggaagggcgtagttttcctgtagaagtgcgttatcgtccaatttcagaaatg
agcattgttggtagtgatgacgatgaatttgatgattttgaggaaaatttacctcgcgct
gttgttgccgcagtagaagaatgttttcaggacgcgaaagataaagggcatcctgaatat
gcagatacgcttatttttgcaagtacagaacaagaaattcgtgagcttcaagaaacttta
cagaaatttggtccacgacatacagaaattttgcctttgtatgcacgtttggctttagca
gaacaacaaaaaatctttaatccaacgggtggtggtcgacgcattattattgctactaac
gttgccgaaacagctttaactgtaccgaatattcgttatgtcattgatagcggttttgcg
cgtatttcacgttataactaccgttctcgtgtgcagcgtttgcctattgaagctgtatct
caagcatctgcaaatcagcgtaaaggtcgttgcgggcgtattgcgccaggtgtgtgtatt
cgtttgtattctgaagatgattttcaaggtcgacctgaatttacagaacctgaaattaaa
cgtacgaacttagcctctgtaattttacaaatgcaaagtttgggtttaggcacatttgat
gatttcgatttcattgaaccacctgatcatcgtttagtgaatgatggtcgcaagctttta
attgagcttggggcgatggtggagaagaaatcattcaattcgaaagaaaatctacctaaa
tttactgatgaaaaaaaatcagcaacttcttcctcctttggtaaagggggggatattaag
gctggagattccctcactaaaattggtcagaaaatggcaaaaatgccaattgacccacgt
cttgctcgaatgattttgggtggggcacattttggcgtgttgaatgaaattttaattatt
gttgcagcattagctgtgcaagatcctcgtgaacgtcctgcagataagcaaatgcaagcc
gatcaaaagcatgctttgttccgtgaagaagattcagactttctgttctacatcaaactt
tgggaaaccttagtttcaaatcgtgaaatgagcgaaaataaacgtcgtacatttgcacga
aaccatttcttaagttggttacgtttacgtgaatggaaaaaaacgcatgaacaattggtc
gatttagccaaaggtttgaatctttcatttaatgaaaagaaagccaattatgaaaattta
catcgcgcgcttttaacaggtttattgtcctttattgccaataaaacagatgaacgaaat
gtgtttatggcggtacgtcagcaaaaggcacgaattttccctgcatcggcattacataaa
accaatacgccttgggtcatggcatttgagatggttgaaacatctcaagtttatcttcgt
acgcttgcgaaaattgaacctgaatggattttactggctgcgggtgatttactgaagcat
cactatttcgaaccgcattggtctaaaaaatctggcgtggtgaatgcttacgatcaaatt
tcattatttggtttaattattgagcctaagcgtcaggtaaattatgaaaaagtggatcaa
gaagctgcgcatgaaatattcctgcgtgatggtttaaccacgggtaatttgggtattaca
ccaccatttttaaaacacaatttactcaaacttgaagaagtagagcgtgttgaagataaa
ttacgtcgtcgtgatttagtggtcgatgaagaaacaatttatcaattttatgcatctaaa
gtgccacctgaagttgcaagtagacgaacatttgaagattggcgagctacggttgaaccg
aaaaatccacgttatttatttgtggaagatgatgcactttggttgaacgaccgtccgact
acgcaacaattcccagattttttacgtaatggcgaattgcgcttagcggcaacgtatcgt
tttgaccctagtcatgatcaagatggtgcgacggttaaaattcctgtgcaagcgcttcca
caagtggatgaggcgatttggtcttggggtattccgggttggcgacaagatttaattgaa
gctttattgaaagctttaccaaaagataagcgacgtaatttagttccaattcctgacaca
gctcgcaagctaatgtcgcgtgtagatgcaatgcatcttaatcagcacatttttaatttc
ttggcatttcagttacgtggcgatcaaattagtgaaaaagacttttcatttgagcgcata
gatgaatatttattgccatttataaaagtgattgatgaaaagggtcgtgtgattgaacaa
gggcgtgatttagcagagttaaaatcacgttgtcgtacagaaacgcatagtcctgttaag
caactaaaaggtgagtttaaaaccttcccagaaagttttgtgtttgaagcatcgcaaaaa
gttacaggtgtgattgttaagcagtatcaagctttagtaccaagcaaaacttttgcgaat
ttagaacagaaagatgaatcgggcgtggtcattcaaacttttaatgatcagtttgaggca
attaaaaaacatcgtgacggtattgttcatttgatttatatgcaattaggcgatttaaca
cgccaattgaaaaagcaaatatctaaaccgcttgcgttggcatattcacccttgggcgat
aaagccaaacttgaacaaatgctcgtgtatgcaaccttgcaaatgtctattcaatctctt
cctgtaaatgcagaagaattccaaaaacttgtgttagatgtgaagaaaaatttcttaacg
cacggtcaaactgctttaagcatgatgagtgatatttatattcaatggcaggatattcgt
cgaaagcttttggttctagatgattcaatttttggaaagaatattgatgatgttgaagat
caacttgatttaatgatgttatctaattttgtatatgaaaaatcaccagatgtatggcaa
gagtttcctcgttatttaaaagcattggtacagcgtttagagcgtttgccaaataactta
acgcgagataatgccgccattgtagatgttgatccgtggatggaaaaactatttaaatac
aaaaatgatgtgcgacttaaagaagtctactttatggttgaggaattgagaatttcttta
tttgctcaaccaatgaaaaccaagatgccaatatctccaacgcgcatacaaaaagtatgg
gataagcttggaatcagttaa
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