Candidatus Accumulibacter phosphatis: CAP2UW1_0126
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Entry
CAP2UW1_0126 CDS
T00966
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
app
Candidatus Accumulibacter phosphatis
Pathway
app03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
app00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAP2UW1_0126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
app03400
]
CAP2UW1_0126
DNA repair and recombination proteins [BR:
app03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAP2UW1_0126
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CAP2UW1_0126
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_21
nSTAND1
AAA_23
DnaJ_CXXCXGXG
AAA_22
NACHT
RsgA_GTPase
nSTAND3
Viral_helicase1
cobW
UBA_Crd2
YmcF-like
Motif
Other DBs
NCBI-ProteinID:
ACV33486
UniProt:
C7RJ00
LinkDB
All DBs
Position
146143..149016
Genome browser
AA seq
957 aa
AA seq
DB search
MDETREIRIRGARTHNLKNVSLDLPRNRLIVITGLSGSGKSSLAFDTLYAEGQRRYVESL
SAYARQFLQRMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARAGT
PYCAEHQQPLEAQTVSQMVDHVLALPEGTRLMILAPVVANRKGEQLELFAELRAQGFARL
RVDGQIHEIDALPKLAKTHKHTVDVVVDRLKVREDLRQRLAESFETALRHADGRAIAYEM
DNEHEHFFSAKFACPVCSYSIQELEPRIFSFNSPMGACQKCDGLGVIQFFDPKRIVVRPE
LSLAAGAIRGWDRRNPFYFQMLCSLAEHYGFAVDTPFDALPDNVRQVVLYGSGRQELPFS
YVNERGRPSVRQHAFEGIVVNLERRYKETDSNAVREELARLISNRTCPACHGSRLREEAR
NVRVGVRASARTLHEINRLPLAEARAYFLALQLPGNKAQIAEKVLKEIVSRLQFLIDVGL
DYLSLDRSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNERLLKTLKRLR
DIGNTVIVVEHDEEAIRGADYVVDIGPGAGVHGGYVVAEGVPQAIIDNPASLTGDFLAGR
RCIAMRAVRRQPEAGRVLQIIGARGNNLRDVSVDIPLGLLTCVTGVSGSGKSTLINDTLY
TAAARHLYGASSEAAEHDRIVGLEYFDKVINVDQSPIGRTPRSNPATYTGLLTPIRELFA
GVPESRSRGYGPGRFSFNVKGGRCEACQGDGVLKVEMHFLPDVYVPCDVCHGKRYNRETL
EVQYKGRNIHEVLQMTVEVARAFFDAVPVVARKLQTLVDVGLSYITLGQAATTLSGGEAQ
RVKLALELSKRDTGRTLYILDEPTTGLHFQDIEMLLTVLHRLVDHGNTVVVIEHNLDVIK
TADWLIDLGPEGGAGGGRILAVGTPERVALEEESHSGRFLRPLLMRRREASAARLGE
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggacgagacccgagagatacgcatccgcggcgcacgcacgcataatctgaagaacgtc
agtctcgacctgccgcgcaaccggctgatcgtgattaccggtctttccggttcgggcaag
tcgtcgctcgccttcgacacgctctacgccgaggggcagcggcgctatgtcgagtccctg
tcggcctacgccaggcagtttctgcaacgcatggaaaagcccgacgtcgatctgatcgaa
gggttgtcgccggcgatctcgatcgagcagaaggcgaccagtcacaatccgcgctcgacc
gtcggcacggtcaccgaaatccacgactacctgcgcctgcttttcgcccgcgccggtacg
ccctactgcgccgaacaccagcagccgctggaagcgcaaaccgtctcgcagatggtcgat
catgtcctggcgctgccggaaggcacccgcctgatgatcctggcgccggtcgttgccaac
cgcaagggcgagcagctcgagctctttgccgaactgcgtgcgcagggttttgcccggctg
cgcgtcgatggtcagatccacgagatcgacgcgctgcccaagctggccaagacgcacaag
cacaccgtcgacgtcgtcgtcgatcggctgaaggtccgcgaagacctgcgccagcgcctc
gccgaatccttcgaaaccgcgctgcgccacgctgacggtcgcgcgatcgcctacgaaatg
gataacgagcacgaacatttcttttccgccaagtttgcctgcccggtgtgctcctattcc
atacaggaactcgagccgcggattttttccttcaacagcccgatgggcgcctgtcaaaaa
tgtgacggtctgggcgtcatccagttcttcgacccgaagcgcatcgtcgtcaggcccgag
ctgtccctggccgccggcgcgattcgcggctgggaccgacgcaaccccttctactttcag
atgctctgctcgctcgccgagcactatggttttgccgtcgacacgccgttcgacgcactt
cccgacaacgtcaggcaggtcgtcctctacggttccgggcggcaggaactgccgttcagc
tacgtcaacgaacgcggccggcccagcgttcgccagcatgccttcgaaggcatcgtcgtc
aatctcgagcgacgctacaaggagaccgactcgaacgccgttcgcgaggaactggcccgc
ctgatcagcaacaggacctgtcccgcctgccacggcagtcgcctgcgcgaagaggcgcgc
aacgtgcgcgtcggcgtgcgcgcgagtgcacgcacgctgcacgagatcaatcgcctgccc
ctcgccgaagcgcgcgcctattttctcgccctccagcttcccggcaacaaggcgcagata
gccgaaaaggtgctcaaggaaatcgtcagccggctgcagttcctcatcgacgtcggcctc
gactacctgtcgctcgaccgctctgccgaaacgctgtccggcggtgaggcgcagcgcatc
cgtctcgcctcgcagatcggctcggggctgaccggcgtcatgtacgtcctcgacgaaccg
tcgatcggcctccaccagcgcgacaacgagcggctcctgaagacgctcaagcgcctgcgc
gacatcggcaataccgtgatcgtcgtcgaacacgacgaggaagccattcgcggcgccgat
tacgtcgtcgacatcggccccggcgccggcgtccacgggggctacgtcgtcgccgagggc
gttccccaggcgatcatcgacaatccggcctcactgaccggtgatttcctggccggccgc
cggtgcatcgccatgcgcgccgtcaggcgccagccggaagccgggcgagtgctgcagatc
atcggtgcgcgcggcaacaacctccgggacgtttcggtcgacatcccgcttggcctgctc
acctgtgtcaccggcgtctccggttcgggcaagtcaacgctgatcaacgacacgctctac
acggcagccgccaggcatctctatggcgccagcagcgaggccgccgagcacgaccgcatc
gtcgggctcgagtacttcgacaaggtgatcaacgtcgaccagagcccgatcggccgtacg
ccacgctccaatccggccacctacaccggcctgctgacaccgatccgcgaactcttcgct
ggcgttccggaatcccgctcacgcggctacgggccaggccgcttttcgttcaacgtcaag
ggcgggcgttgcgaggcctgccagggcgacggcgtgctcaaggtcgaaatgcactttctg
cccgatgtttacgttccctgcgacgtctgtcacggcaagcgttacaaccgggagacgctt
gaagtccagtacaagggccgcaacattcacgaggtcctgcagatgactgtcgaggtggcg
cgtgcctttttcgacgctgtgccggtcgtcgcccgcaagctgcagacgctggttgacgtc
ggtctgagctacatcacgctcggtcaggcggcgacgactctttcgggtggcgaggcacag
cgcgtcaagctcgcccttgaactatccaagcgcgacaccggcagaacactttatattctt
gacgaaccgaccaccgggctgcattttcaggatatcgagatgctgctgacggtgctgcac
cgcctcgtcgatcacggcaatacggtcgtggtcatcgaacacaacctcgacgtcatcaag
acggccgactggctgatcgacctcgggccggagggtggcgccggcggcggacgaatcctc
gccgtcggcaccccggaacgtgtggctctggaggaggaaagccatagcggccgcttcctg
cggccgctactcatgcgccggcgcgaggcctctgcggcccgcctgggcgagtga
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