Candidatus Accumulibacter phosphatis: CAP2UW1_0510
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Entry
CAP2UW1_0510 CDS
T00966
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
app
Candidatus Accumulibacter phosphatis
Pathway
app03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
app00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAP2UW1_0510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
app03019
]
CAP2UW1_0510
03400 DNA repair and recombination proteins [BR:
app03400
]
CAP2UW1_0510
Enzymes [BR:
app01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAP2UW1_0510
Messenger RNA biogenesis [BR:
app03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CAP2UW1_0510
DNA repair and recombination proteins [BR:
app03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CAP2UW1_0510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
HHH
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ACV33861
UniProt:
C7RL39
LinkDB
All DBs
Position
615494..617308
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AA seq
604 aa
AA seq
DB search
MISPAAEILRRVFGYPAFRGEQAAIVDQIVGGGDALVLMPTGGGKSLCYQIPALLRPGVG
VVVSPLIALMQDQVDALRQVGVQAAYLNSSLDFRAVVDTERRLQAGELDLIYVAPERLLT
DRFIGLLEQLIARDQVSLFAIDEAHCVSQWGHDFRPEYIQLSQLHERFPGIPRIALTATA
DQLTRQEIVSRLSLEDARLFVASFDRPNIRYTIVERDNPRRQLLAFLGVHGGAAGIVYCL
SRRKVDETAAWLNAQGVTALPYHAGLAAADRQRHQQRFLREDGVVMVATIAFGMGIDKPD
VRFVAHLDLPRSLEAYYQETGRAGRDGEASEAWMTYGLNDVVIHRQMIEDSAAPVEQKRV
ERQKLDSMLAYCESARCRRVVLLNYFGEATTPCGNCDVCLDPPVVWDGTVVAQKALSAAL
RTGQRFGAGHLIDILRGKTTDKVLQFGHDRLPTFGVGADMDDTGWRSVFRQLLAGGLLEA
DAAAWGALKLTDAARPVLKGESRLQLRRQPARPQGRLARTKTATTRSSLPTNDPPLVATL
RQWRSEKAREQGVPAYVILHDRTLYEIAELLPNSRQALLSVPGIGLAKAERYGEELLAIV
AGSA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
gtgatctcgccggctgccgagatcctgcgccgggttttcggctatccggcgtttcgcggc
gagcaagcagcgatcgttgaccagatcgtcggtggcggcgacgctctggtcctgatgccg
accggcggcggcaagtctctgtgctatcagattccggcccttctgcggccgggagttggc
gttgtcgtttcgccgctgattgccctgatgcaggaccaggtggatgccttgcgacaggtt
ggtgtgcaggctgcctacctgaactcctcgctggacttccgggcggtggtggacaccgag
cgccggttacaggccggcgaactcgacctgatttacgtcgcgcctgaacgtctacttacc
gaccgcttcatcggcctgctcgagcagctcatcgcgcgcgaccaggtctcactgttcgcg
atcgacgaagcgcattgcgtttcgcaatgggggcacgacttccgcccggagtacatccag
ctctcgcagttgcacgagcgcttccccggcattccgcgcatcgccttgacggcgacagcg
gaccaactgacacggcaggagatcgtcagccgcctcagcctcgaggacgcgcgcctgttc
gttgccagtttcgaccggccaaacatccgctacaccatcgtcgagcgcgacaatccgcgc
aggcaactgctcgcctttctcggcgtccatggcggtgcggccggaatcgtctattgtctg
tcgcgccgcaaggtcgacgaaaccgctgcctggctcaacgcccagggcgtgacggccttg
ccctaccatgcggggctggcggctgccgaccgccaacgccaccaacaacgtttcctgcgc
gaggatggggtggtgatggtggccaccatcgcttttggtatgggcatcgacaagcccgac
gtgcgtttcgttgcccaccttgacttgcccagaagcctggaagcctattatcaggagacc
gggcgcgccgggcgcgacggcgaagcgtcggaagcgtggatgacctatggactgaatgac
gtggtgatccaccgccagatgatcgaggactcggcggcgcctgtagaacagaaacgcgtc
gagcgacagaagctcgacagcatgctcgcctactgcgagtcggcgaggtgccgccgcgtt
gtgctcctcaattactttggcgaggcgacgacgccctgcggcaactgcgatgtgtgtctc
gatccgccggtggtctgggacggcacggtggtggcccagaaagcgctgtcggcagccttg
cgcaccggccagcgtttcggtgccggacacctgatcgatatcctgcgcggcaagactacc
gacaaggttctgcagtttgggcacgatcgcctgccgacctttggagttggcgcggacatg
gacgataccggctggcgatcggtgtttcggcaacttctggctggcggcctgctcgaagcc
gacgccgccgcttggggcgcgctgaaactgacggacgccgcgcgtccggtgctgaagggg
gagagccggctgcaactgcgtcgccagccagcccgcccgcagggcaggctggccaggacg
aagacggcgacgacccgcagcagcctgccgacgaacgatccgccgctggtcgccacgctg
cgccagtggcggagcgagaaagcccgtgagcagggtgtcccggcctacgtcatcctgcac
gaccgcacactttacgagatcgccgaactgctcccgaattcccggcaggcactcctctcc
gtgccgggtattggcctggccaaggcggagcgttacggcgaggaactgctggcgatcgtc
gccggaagtgcctga
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