Candidatus Accumulibacter phosphatis: CAP2UW1_0952
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Entry
CAP2UW1_0952 CDS
T00966
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
app
Candidatus Accumulibacter phosphatis
Pathway
app03420
Nucleotide excision repair
app03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
app00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAP2UW1_0952
03430 Mismatch repair
CAP2UW1_0952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
app03400
]
CAP2UW1_0952
Enzymes [BR:
app01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAP2UW1_0952
DNA repair and recombination proteins [BR:
app03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAP2UW1_0952
MMR (mismatch excision repair)
Other MMR factors
CAP2UW1_0952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ACV34289
UniProt:
C7RPP6
LinkDB
All DBs
Position
complement(1092169..1094343)
Genome browser
AA seq
724 aa
AA seq
DB search
MSDLLANLNPPQLAAVTLPAQHALILAGAGSGKTRVLTTRIAWLISTGQVGPQGILAVTF
TNKAAKEMQSRLAAMLPINTRGMWIGTFHGLCNRLLRAHHREAGLPETFQILDAADQLSA
IKRLLKNLNVDDEKFPPRELMHFINAHKEQGIRAAQAEAYDHYTSRRVELYTEYEGQCQR
EGVVDFAELLLRSYELLQRNEPLCRHYQERFRHILVDEFQDTNRLQYAWLKLLAGRGSVR
PETPGACVFAVGDDDQSIYAFRGAEIGNMRDLQREFELPSVIRLEQNYRSHGNILDAANA
LIKQNVGRLGKNLWTEAGAGEPIRVFEGISDFDEARFIVDEISELLREGIGRDQIALLYR
SNAQSRVLEHQLFTAGVPYRVHGGLRFFDRQEIKHALAYLRLIANPDDDTAFARVVNFPT
RGIGTRSLEALQEAAQRNNASLYNAAASLAGKAGTAVARFVALIEDLRADTRARSLPEVV
DHLIDKTGLRQHYLAEKEGQDRLENLDELINAATTFLYEDSDQDGEPAANGGPLASFLAH
ASLEAGEHQAGEGETAVQLMTVHAAKGLEFDVVFITGLEQGLFPHENAAQERAGLEEERR
LMYVAVTRARQRLYLTHAQTRMLHGQTRYCLPSSFVDELPAELLRRINRTASAGQPGRGA
ASAARQPPTAGHGLRIGQNVRHARFGVGVIVSTEGAGPEARVQVNFGAAGMKWLALEYAR
LTPA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatctgctcgccaacctcaatccgccgcaactcgccgccgtgacgctgccggca
cagcacgcgctgattctggccggcgccggcagcggcaagacgcgtgtgttgacgacgcgc
atcgcctggctgatctcgaccggacaggtcggcccgcagggaatcctggcggttaccttc
accaacaaggcggcgaaagagatgcaatcgcgtctcgcggcgatgctgccgatcaacacg
cgcggcatgtggatcggcaccttccacggcctgtgcaatcgcctgctgcgcgcgcaccac
cgcgaggccgggttgccggagactttccagatcctcgatgcggccgatcagctgtcggcg
atcaagcgcttgctgaagaatctcaacgtcgacgacgagaagtttccgccgcgcgagctg
atgcatttcatcaacgcgcacaaggaacagggcatccgcgcagcacaggccgaggcctac
gatcattacaccagccgccgcgtcgagttgtacaccgagtacgaagggcagtgccagcgc
gaaggcgtcgtcgatttcgccgagctgctgctgcgctcgtacgaactgttgcagaggaac
gagccgctttgccggcactatcaggagcgtttccggcacatcctggtagacgagttccag
gacaccaaccggctgcagtatgcctggctgaagctcctcgccgggcgcggcagcgtgcgc
ccggaaacgcccggcgcctgtgtctttgccgtcggcgacgacgaccagtcgatctacgcc
ttccgcggtgcggagatcggcaacatgcgcgacctgcagcgcgagttcgagttgccgagc
gtaattcgcctggagcagaattatcgctcgcacggcaacatcctcgacgcggcgaacgcg
ctgatcaagcagaacgtcggccgcctcggcaagaacctgtggaccgaagccggtgccggc
gagccgatccgggttttcgagggcatttccgacttcgatgaagcgcgtttcatcgtcgac
gagatctcggaactgctgcgcgaagggatcgggcgcgaccagatcgcactgctctatcgc
tcgaacgcgcagtcgcgcgtcctcgaacatcagctattcacggctggcgtgccgtatcgc
gtgcacggcgggctgcgcttctttgaccggcaggaaatcaagcatgccctcgcctacctg
cgcctgatcgccaacccggacgacgacacggcctttgcccgggtggtcaattttccgacc
cgcggcatcggtacgcgcagcctcgaagccttgcaggaagctgcgcagcggaacaacgcc
agcctctacaacgctgccgcgagtctggccggcaaggccggcacggcggttgcccgcttc
gtcgcgttgatcgaggacctgcgggcggacacccgggctcgctccttgcccgaggtggtc
gatcacctgatcgacaagacaggactgcggcagcactacctggccgaaaaggaaggacag
gaccgactcgagaacctcgacgaattgatcaacgccgcgaccaccttcctctacgaggac
agcgaccaggacggcgagcccgccgccaatggcgggccgctcgcgtccttcctggcacac
gcctcgctggaagccggcgagcatcaggccggcgaaggcgaaaccgcggtgcagttgatg
accgtgcatgccgccaagggactggagttcgacgtggtcttcatcaccggcctcgagcag
gggctctttccgcacgagaacgcggcgcaggagcgcgccggcctggaagaggagcggcga
ttgatgtacgtcgccgtcacgcgcgcgcgccagcggctctacctgacgcatgcgcagacg
cgcatgctgcacgggcagacgcgctactgcctgccttcgagctttgtcgacgaactgccg
gcggagctgctgcgcaggatcaaccgcaccgccagcgctggccaaccggggcgaggcgcc
gcaagcgccgcgcggcaaccgccgacagccggccatggcctgcgaatcggccagaacgtg
cggcacgcgcgttttggcgtcggagtgatcgtgtcgaccgaaggtgccggcccggaagcc
cgcgtgcaggtcaacttcggcgccgccggcatgaagtggctggccctcgagtacgccaga
ctgacaccagcctga
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