Candidatus Accumulibacter phosphatis: CAP2UW1_1764
Help
Entry
CAP2UW1_1764 CDS
T00966
Name
(GenBank) protein of unknown function UPF0027
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
app
Candidatus Accumulibacter phosphatis
Brite
KEGG Orthology (KO) [BR:
app00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
app03016
]
CAP2UW1_1764
Enzymes [BR:
app01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CAP2UW1_1764
Transfer RNA biogenesis [BR:
app03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CAP2UW1_1764
Prokaryotic type
tRNA splicing ligases
CAP2UW1_1764
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ACV35069
UniProt:
C7RUL7
LinkDB
All DBs
Position
1991642..1992883
Genome browser
AA seq
413 aa
AA seq
DB search
MEQGITPEASIETLRVPGAAPIKMWTEGVPVEEEARQQLINTARLPFIFRHLAVMPDVHL
GKGSTIGSVIPTRGAIIPAAVGVDIGCGMIATRTTLDAADLPDNLHGLRSAIERAVPHGR
TVGRGRRDEGSWENPPDLVNAHWAVLLPRFQRLVEKYPRLKSTNNHKHLGTLGTGNHFIE
VCLDEAQRVWLMLHSGSRGVGNAIGCTFIELAQADMRQHLARLPDRDLAYLEEGSAHFAD
YVEAVAWAQDYARHNRAAMMANLIAAARTAIGKPFAVDVEAVNCHHNYVQRETHFGAEIF
VTRKGAVSARQGELGIIPGSMGARSYIVRGLGNPESFCSCSHGAGRVMSRNEARRRFTVA
DQERATAHVECRKDKDVIDEIPMAYKDIDAVMHAQRSLVEVVHTLRQVVCVKG
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggggatcaccccggaagcgtcgatcgaaaccctccgggtgcccggcgcggcg
ccgatcaagatgtggaccgaaggcgtgccggtcgaggaggaagcgcgtcagcagttgatc
aataccgcgcgcctgcctttcatcttccgccatctggcggtgatgccggatgtgcatctc
ggcaagggctcgacgataggcagcgtcatcccgacgcgcggcgcgatcatcccggcggcg
gtgggcgtggacatcggctgcggaatgatcgccacgcgcacgacgctggacgccgccgac
ctgcccgacaatctgcatggcctgcgcagtgccatcgagcgcgccgtcccgcacgggcgc
acggtcggccgcggccggcgtgacgaaggcagctgggagaacccgccggatctggtcaac
gcgcactgggcggtgttgttgccgcgcttccagcgcctcgtcgagaaatacccgcgcctg
aagagcaccaacaaccacaagcacctgggtacgctgggcaccggcaatcacttcatcgag
gtgtgcctcgacgaggcccagcgcgtgtggctgatgctgcactccgggtcgcgcggcgtc
ggcaacgccattggctgcacgttcatcgaactggcgcaggcggacatgcggcaacatctc
gccaggctgccggaccgcgacctggcctatctcgaagaaggcagcgcgcacttcgccgac
tatgtcgaggcggtcgcctgggcgcaggactacgcccgccacaaccgcgcggcgatgatg
gccaacctgatcgccgccgcgcgcacggcgatcggcaaacctttcgctgtcgacgtcgaa
gcggtgaactgtcatcacaactacgtgcagagagaaacgcacttcggcgccgagatcttc
gtcacccgcaagggcgcggtatcggcccggcagggcgaactgggcatcatccccgggtcg
atgggcgcgcgcagctacatcgtgcgcggcctcggcaacccggagtcgttctgctcgtgc
agccacggcgccggccgcgtcatgagccgcaacgaagcccgccgccgctttaccgtcgcc
gatcaggaacgcgccaccgcacacgtcgaatgccgcaaggacaaggacgtcatcgacgag
atcccgatggcctacaaggacatcgacgcggtgatgcacgcgcagcgctcgctggtcgaa
gtggtgcataccctgcggcaggtggtgtgtgtgaagggctga
DBGET
integrated database retrieval system
