Candidatus Accumulibacter phosphatis: CAP2UW1_2414
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Entry
CAP2UW1_2414 CDS
T00966
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
app
Candidatus Accumulibacter phosphatis
Pathway
app03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
app00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CAP2UW1_2414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
app03400
]
CAP2UW1_2414
Enzymes [BR:
app01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CAP2UW1_2414
DNA repair and recombination proteins [BR:
app03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CAP2UW1_2414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_30
DUF6758
Motif
Other DBs
NCBI-ProteinID:
ACV35703
UniProt:
C7RR22
LinkDB
All DBs
Position
complement(2769384..2773103)
Genome browser
AA seq
1239 aa
AA seq
DB search
MSMAVAPDVAGTIDLDVFACPLDGLRLIEASAGTGKTWNLCGLYLRLLLEKGLDAPQILV
VTFTNAATAELRERIRSRIVDVLAYLQRGASAADPFVTRLVAAVENNASVDRPQMRMRLE
AALHTFDEAAVFTIHGFCQRALSETPFAAGLPFSLDLLHDDQPLRLEAVSDFWRRHIASG
AISPALADYLAQRQDSPEGWARLLGRQVAKSHSRVIWPAELASEAAIDTPGLAAAFARAG
QLWGGDGAAPTGALLAGLAALHAGSYKADGVSTGARAWTLWLASGDPLRAPDPEKSKARL
FTANFIAARKRNNQTPPTHPFFHAANDVLARHASVTQALHLARLYLLRRMLDESGAALRQ
QKRRQRVQSFDDMLQNVDAALTSGDFPWLAGFLRSRYPVALIDEFQDTDPLQYAIFSRIY
GAGEAPAAGPLFLVGDPKQAIYSFRNADLHTYLAARRQAGARYTLRHNQRSTADLIAASN
ALFTANPHAFILAGLNYEPVTVGDKPRPPLTDHSEEDPAALRVWRLPAANGEYLLRGEAK
KQVLRATAGEVARLLRAAQAGRITLGERALAPGDIAILVKSHAQGRLLRDALLQVGIGSV
ELSQHSIFHTPDAEDLERVLLAIREPARPSLLYSALATELLGLNATGVAALAADEMGLLQ
TIARFSGYRETWLRRGFGVMLRAWMDSEAVAFRLLARSDGERRLTNLLHLGELLQQASAD
QPAPDALLRWLASRRRDDGAEEVHQLRLESDRNLVQIVTIHKSKGLEYGIVFCPFLWDGH
QSNFGEDEGKEYHDDDGLPVIDFRLELDAADAEEIKRRRREEKDAEFMRLLYVALTRAAQ
RCYLVAGCYANLAFGKPSMAQGTHSLLNWLVAGKDMSYADWLKHKRSPEEIEAAWRALAT
TAGPPLSLSDLPGEAPTPLASTAVSAASLSALVAPRTMAAGWRIGSFSSLQHGADSEASA
SDHDGRAVPALPAVSGPAADIGPDDILLFARGPAAGDCVHALFERIDFTDPGRWPAIIDE
VLASHPLSPVGPPNGDSARRPARMLRRLLDDVLATSLPGGIVLSTVGRRQRLVELGFNLP
AGLTAPRLNDWLAAHGYPLPRLGFPPLDGYLKGFIDLVFCHANRFHVLDWKSNHLGFAAA
DYGQQQVAAAMAEHGYHLQYLIYCVALHRYLRCRIADYDYDRHFGGVYYLFVRGVRPDWR
AVGTDGERSACGVYHHRPPRSTIESLDSLLSHRSLANHA
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggctgttgcgccggacgttgccggcacgatcgacctggacgtcttcgcctgc
ccgctcgacggcctgcgcctgatcgaggcgtcggccggcaccggcaagacctggaacctc
tgcgggctctacttgcggctgctgctcgaaaaggggctggacgcgccacagattctggtt
gtcaccttcaccaacgcggccaccgctgaactgcgcgagcgcatccgcagccgcatcgtc
gatgtccttgcctatctgcagcgcggcgccagcgctgccgacccctttgtcacccggctc
gtcgctgccgtcgagaacaacgccagcgtcgaccgcccgcagatgcgcatgcgcctcgaa
gcggcactgcacaccttcgacgaggccgccgtgttcacgattcacggcttctgccagcgt
gcgctgtccgaaacgccgttcgccgccggtttgccgttcagcctcgacctgttgcacgac
gaccagccgctgcgcctcgaagccgtcagcgacttctggcgacgccatatcgccagcgga
gcgatctcgccggccctcgcggactacctcgcgcagcgccaggattcgccggaaggctgg
gcaaggctgctcggccgccaggtggccaagtcccactcgcgcgtcatctggccggccgaa
ctggcgagcgaagcggcgatcgacacgcctggcctggccgcagctttcgcgcgcgccgga
caactgtggggaggcgatggcgccgcacccaccggcgcgctgctggccggactcgccgcg
ctccacgccggttcgtacaaggcagacggcgtatcgaccggcgcccgcgcctggaccctg
tggttggccagcggcgacccgttgcgcgctcccgatccggaaaagagcaaggcgcgtctg
ttcacggcgaacttcatcgccgccaggaaaagaaataaccagacgcctcccacacatcct
ttcttccacgcggccaacgatgtgctggcgcggcacgcgtcggtgacgcaggcgctgcac
ctcgcccgcctgtatctgctgcgcaggatgctcgacgagtccggcgccgcgctgcgccag
cagaagcgccggcagcgcgtgcaatccttcgacgacatgctccagaacgtcgatgcggcg
ctgacctccggcgacttcccgtggctcgccggattcctgcgcagccgctatccggtcgcc
ctgatcgacgaattccaggacaccgacccgctgcagtatgcgatattcagccgcatctac
ggcgccggcgaggcgccggctgcgggcccgctgttccttgtcggcgatcccaaacaggcg
atctacagctttcgcaatgctgacctgcatacctacctggccgcccgccgccaggctggc
gcgcgctacaccttgcgccacaaccagcgctcgaccgcggacctgatcgccgccagcaac
gcactcttcaccgccaatcctcacgccttcattctcgccggcctcaactacgagccggtg
accgttggcgacaagccgcgcccaccgctgaccgaccacagcgaggaagacccggcggcg
ctacgcgtctggcggctgccggctgccaacggcgagtatctgctgcgcggcgaagcgaag
aagcaggtgctgcgcgccaccgccggcgaagtggcgcgcctgctgcgcgccgcgcaggcc
ggccgcatcacgctcggcgaacgcgctctggcgcccggcgacatcgccatcctcgtcaag
agccacgcccaggggcgcctgctccgggacgcgctgctgcaggtcggtatcggcagcgtc
gagctttcgcagcacagtattttccacaccccggacgccgaggatctcgaacgcgtactg
ctggcgatccgcgaaccggcgcgcccgtcgctcctctacagcgctttggccacggaactg
ctgggcctcaatgccaccggcgtcgctgcgctggccgccgacgagatggggctgctgcag
accatcgcgcgtttcagcggctaccgcgagacctggctgcggcgcggtttcggcgtcatg
ctgcgcgcctggatggacagcgaggcggtcgctttccggctgctcgcgcgcagcgacggc
gaacgacggctgaccaatctgctccacctcggcgaactgctgcagcaggccagcgccgat
cagccggcgccggacgcgctgctacgctggctggccagtcgtcggcgcgacgacggtgcc
gaggaggtccatcaactgcgcctcgagtcggaccgcaacctcgtccagatcgtcaccatc
cacaaatccaagggccttgagtacggcattgtcttctgtcctttcctctgggatgggcac
cagtcgaacttcggcgaggacgagggcaaggagtatcacgacgacgatgggctgccggtg
atcgacttccgcctcgaactcgatgcggccgatgccgaggagatcaagaggcgaagacgc
gaggagaaggatgccgagttcatgcgcctgctctacgtggcgctgacgcgcgccgcgcag
cgctgctacctggtcgccggctgctacgcgaacctggcgttcggcaaaccatcgatggca
cagggcactcacagtctgctcaactggctggtcgccggcaaggatatgtcctacgccgac
tggctgaagcacaagcgatcgccagaggagatcgaagcggcctggcgtgcgctcgccacg
acggcgggcccgccgctgtcgctgagcgacctgcccggcgaggcgccgacgccgctcgcc
agcaccgccgtgtccgccgccagcctgagcgcgctggtcgcaccccggacgatggctgcc
ggctggcgaatcggcagcttcagcagcctgcagcatggcgccgacagcgaagcgtcggcg
agcgaccacgacggccgcgccgtccctgctctgccggcggtgagcgggccggcagccgac
attgggccggacgacatcctcctcttcgcgcgcggaccggccgccggcgactgcgtgcat
gcgctcttcgagcgtatcgacttcaccgatccgggccgctggccagccatcatcgacgaa
gtgctggcgagccacccgctgtcaccggtgggaccgccgaacggcgattccgcccgccgt
ccggcgcgcatgctgcgccgactgctcgacgacgtcctggcgacatcgctgcccggcggc
atcgtcctgtcgacagtggggcgccggcaacgtctcgtcgagttgggtttcaacctgccc
gccggcctgacggcgccgagactcaacgactggctggcggcgcacggctacccgctgccg
agactcggcttcccgcccctcgacggctacctgaagggcttcatcgacctggtgttctgc
cacgcaaatcgcttccacgtccttgactggaaatcgaaccatctcggttttgccgctgcc
gactatggccagcagcaagttgccgcggcgatggccgaacacggttatcacctccaatac
ctgatctactgcgtcgcgctgcaccgctacctgcgctgccggatcgccgactacgactac
gatcgccacttcggcggtgtctactatctgttcgtgcgcggcgtccgcccggattggcgc
gctgtgggcactgacggcgaacgcagtgcctgcggtgtttatcaccatcgcccaccgcga
tccaccatcgaatcgctcgacagcttgctgtcccacaggtcactggcgaaccacgcatga
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