Candidatus Accumulibacter phosphatis: CAP2UW1_2730
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Entry
CAP2UW1_2730 CDS
T00966
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
app
Candidatus Accumulibacter phosphatis
Pathway
app03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
app00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CAP2UW1_2730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
app03400
]
CAP2UW1_2730
Enzymes [BR:
app01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CAP2UW1_2730
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CAP2UW1_2730
DNA repair and recombination proteins [BR:
app03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CAP2UW1_2730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
Zn_ribbon_6
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ACV36012
UniProt:
C7RSW0
LinkDB
All DBs
Position
complement(3158724..3159551)
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AA seq
275 aa
AA seq
DB search
MPELPEVEVSRQGLLPLLRGQRILGAVVRTPRLRHEIPPDLASRLTGLRLDGILRRGKYL
LLDCESSARGGWIILHLGMSGSLRLVPPETPPRKHDHVDLVFGQSVLRLRDPRRFGAVLW
HAGGDVESHPLLAALGVEPLSEGFSGDWLYAATRRRRVAIKPLLMDSHFLVGVGNIYAAE
SLFRAGISPLRTADRISLARYRRLVTAIRATLEAAIAAGGSSVRDYVHSDGGAGCFQLSC
AVYDRAGQPCPACAGEVRTIRQSGRSTFYCPRCQR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactccccgaagttgaagtcagtcgccagggattgcttcccctattgcgggga
cagcgtattctcggggcggttgtgcgcactccgcgcctgcgtcacgagattcctcccgat
ctcgcgtcgcggctcaccggcctgcgccttgacggcatcctccgacgcggcaagtatctg
ctgctggactgcgaaagcagcgcgcggggcggctggatcattctccacctcggcatgtcg
ggcagcctgcgcctggtgccgccggagactccaccgcgcaagcatgatcacgttgacctg
gtcttcggccaaagcgttctgcgcctccgggatccccgtcgtttcggggccgtgctgtgg
cacgcgggtggcgatgtcgagagtcatccgctgctcgctgctctcggcgtcgaacccctc
tccgaaggattcagcggcgattggttgtacgcggcgacgcggcgacgccgtgtagcgatc
aaacccttgctgatggatagccatttcctggtgggcgtcggcaacatctacgccgccgag
agtctgttccgcgctggaatctcgccgctgcggaccgccgatcgcatcagtctggcgcgc
tatcggcggctggttacggcgatccgcgccacgctcgaagcggcgatcgctgccggcggc
agtagcgtacgggactacgtgcacagcgatggcggagctggctgcttccagctttcctgc
gccgtttacgaccgcgccggccagccgtgtccggcctgcgccggggaggtgcgcacgatt
cgccagtcgggtcgctcgactttttactgcccgcgttgccagcgctga
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