Candidatus Accumulibacter phosphatis: CAP2UW1_3150
Help
Entry
CAP2UW1_3150 CDS
T00966
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
app
Candidatus Accumulibacter phosphatis
Pathway
app03030
DNA replication
app03430
Mismatch repair
app03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
app00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAP2UW1_3150
03430 Mismatch repair
CAP2UW1_3150
03440 Homologous recombination
CAP2UW1_3150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
app03032
]
CAP2UW1_3150
03400 DNA repair and recombination proteins [BR:
app03400
]
CAP2UW1_3150
Enzymes [BR:
app01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CAP2UW1_3150
DNA replication proteins [BR:
app03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CAP2UW1_3150
DNA repair and recombination proteins [BR:
app03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CAP2UW1_3150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
RNase_H_2
RRM_MARF1
Motif
Other DBs
NCBI-ProteinID:
ACV36422
UniProt:
C7RVE9
LinkDB
All DBs
Position
3628081..3629490
Genome browser
AA seq
469 aa
AA seq
DB search
MIPARLAFIGLETTGANPLRDRITKIGVLEAEGDRVSTWSTLVNPQRPIPEFIQQLNGSR
DATVADAPTFAQVAAELADRLHGRLFIAHHARFNYAFVKREFQRLGKSFRADVLCTVRLS
RKLFPEHQKHHLESLMVRHDLTTGVHSGALAAAHLLGQFWCVLKRERGEEALAEAIRQQL
KRPSLPPHLDSALLDDLPESPGVYLFYGDNDALLYVGKSVNLRQRVRAHFASDLREYKEM
RLSQEVRRLRWQETVGELGALLLESRLIKECQPIHNHRLRRSSDLCTWQLVQVAPGDCRL
RLVSGQTADFVRSNDLFGLFANRREATDSLRKVAAANGLCPIILGLEKPAGPGRPCFSHQ
VKHCRGACVGKEAIGVHSDRMLSALMKLKLTAWPYPGAIGVVERDDLRRVEEVHVVNGWR
HLGSARSEVGVQEILLGQSGQGRFDRDTYRLLAAHLGKGRVQVRLLTER
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtgattcccgcgcggctcgccttcatcggcctggagaccaccggggccaatccgttacgg
gaccgcatcacaaagatcggcgtgctggaagcagagggtgaccgggtctcgacctggagc
actctggtcaacccacagcggcctatccctgaattcatccagcaactcaacggtagccgc
gacgcgacggtggccgacgccccgaccttcgcccaggtcgccgcagaactggctgatcgc
ctgcacgggcgtctgttcattgcccatcatgcccgcttcaactatgccttcgtcaagcga
gaattccaacgtctcgggaagtccttccgggccgacgtgttgtgtactgttcgtctgtct
cgcaagctcttcccggaacaccagaagcaccacctggagagtctcatggtccgtcatgat
ttgacgacgggcgtccactccggcgccttggccgctgcccacctgcttgggcagttctgg
tgcgtgttgaaacgggaacgcggcgaagaggctctggccgaagccatccgtcagcagctc
aagcgccccagcctgccgccccacctggattctgccctactcgacgatctgcccgaatct
cccggggtgtacctgttctacggcgacaacgacgcacttctgtacgtggggaaaagcgtc
aacctgcgtcagcgcgtacgcgctcacttcgcgtccgacctgcgtgagtacaaggagatg
cgcctcagtcaggaagtgcgtcgccttcgctggcaggagacggtcggtgagctgggcgcc
ctgctgctggaatcgcgactgatcaaggaatgtcagccgatacacaatcatcggttgcgc
cgctcttcggacctgtgcacctggcagttggtgcaggtggcgccaggcgattgccggctc
agactggtcagcggccagactgccgatttcgtgcgctcgaacgaccttttcggtctcttt
gccaaccggcgggaagccaccgacagcctgcgcaaggtggctgcagcaaatggactgtgc
ccgataatcctcggactggagaaacccgccggccccggacgcccctgcttttcccatcag
gtcaagcattgccggggcgcctgtgtgggcaaggaagccatcggcgtgcacagcgatcgc
atgttgtcggcgctgatgaagctgaagctcaccgcctggccctaccccggagcgatcggc
gtcgtcgagcgggacgatttgcggagagtggaggaagtccacgtcgtcaacggctggcgg
cacctgggcagcgcgcgcagcgaggtcggagtccaggagatccttctgggtcagtcgggc
caggggcgattcgaccgggacacctacagactgctggccgcgcatctgggcaaggggcga
gtgcaggtgcggttgttgaccgagcggtaa
DBGET
integrated database retrieval system
