Candidatus Accumulibacter phosphatis: CAP2UW1_3334
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Entry
CAP2UW1_3334 CDS
T00966
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
app
Candidatus Accumulibacter phosphatis
Pathway
app03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
app00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAP2UW1_3334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
app03021
]
CAP2UW1_3334
03019 Messenger RNA biogenesis [BR:
app03019
]
CAP2UW1_3334
Transcription machinery [BR:
app03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CAP2UW1_3334
Messenger RNA biogenesis [BR:
app03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CAP2UW1_3334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
NACHT
S1CSD-TOTE-2
Fungal_virus_P2_C
Mor
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACV36598
UniProt:
C7RIM4
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All DBs
Position
3834396..3835652
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AA seq
418 aa
AA seq
DB search
MHLSELKALHVSQLLDMAITNNVEGANRLRKHELIFALLKNQARKGETIFGDGTLETLSD
GFGFLRSPDTSYLASTDDIYVSPSQIRRFNLHTGDTIEGEIRTPKDGERYFALVKVDKIN
GEAPEASKNKILFENLTPLHPSEHLKLERDIRGEENITSRIVDIIAPIGKGQRGLLVASP
KSGKTVMMQHIAHAITTNHPDVTLIVLLIDERPEEVTEMTRSVRGEVVASTFDEPATRHV
QVAEMVIEKAKRLIEHKRDVVILLDSITRLARAYNTVQPASGKVLTGGVDANALQKPKRF
FGAARNIEEGGSLTIIATALIDTGSRMDDVIYEEFKGTGNMEIHLDRRMAEKRVYPAINV
NRSGTRREELLLKPDVLQKMWVLRKLLYNMDDLEAMEFLLDKIKATKNNGEFFDSMRR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcacctatccgaactcaaggcactccatgtaagccagcttctcgacatggccatcacc
aataacgtcgaaggagcaaaccggctgcgcaagcacgaactcatcttcgcgttgctcaag
aatcaggccaggaaaggcgagaccatcttcggcgatggcaccctggagacgctatccgat
ggatttggcttcctgcgctccccggacacctcgtacctcgccagcaccgacgacatctac
gtcagcccgagccagatcaggcgtttcaatctgcataccggtgacacgatcgagggtgag
atccgtacgccgaaggacggtgagcggtatttcgctctggtcaaggtcgacaagatcaat
ggcgaggccccggaggcgtcgaagaacaagattctcttcgagaacctgacgcccctgcac
ccctccgaacacctcaagctcgaacgcgacatccggggcgaagagaacattaccagtcgc
atcgtcgacatcatcgcacccatcggcaaaggccagcgaggtctgcttgtcgccagccca
aagagcggcaagaccgtgatgatgcaacacatcgcacacgccatcaccaccaaccacccg
gacgtcaccctgatcgtgctgctgatcgacgaacgccccgaagaagttacggaaatgacg
cgctcggtccgtggtgaagtcgtcgcttcgacctttgacgaaccggcgacccgtcatgtt
caggtggccgaaatggtcattgagaaagccaaacgcctgatcgaacacaagcgcgatgtg
gtcatcctgctcgactcgatcacgcgcctggcacgcgcttacaacaccgtgcaaccagcc
tccggcaaggtcctcaccggtggcgtcgatgccaacgctctccagaagccaaagcgcttc
tttggtgcggcacggaacatcgaggaaggcggctcgctaaccatcatcgccactgcgctc
atcgataccggcagccgcatggacgacgtcatctacgaggagttcaagggcacgggcaac
atggagatccaccttgatcgtcgaatggccgagaaaagggtctacccggcgatcaacgtc
aaccggtccggcacccgccgcgaggaactcctgctcaagccggacgtcctgcaaaagatg
tgggttttgcgcaagctcctgtacaacatggatgatctggaagcaatggagttcctgctc
gacaagatcaaggccaccaagaacaacggcgagttcttcgactcgatgcgccgctga
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