Candidatus Accumulibacter phosphatis: CAP2UW1_3499
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Entry
CAP2UW1_3499 CDS
T00966
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
app
Candidatus Accumulibacter phosphatis
Pathway
app03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
app00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CAP2UW1_3499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
app03021
]
CAP2UW1_3499
03400 DNA repair and recombination proteins [BR:
app03400
]
CAP2UW1_3499
Enzymes [BR:
app01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CAP2UW1_3499
Transcription machinery [BR:
app03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CAP2UW1_3499
DNA repair and recombination proteins [BR:
app03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CAP2UW1_3499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
RPOC_hybrid
Peptidase_M23
Baculo_ME53
Motif
Other DBs
NCBI-ProteinID:
ACV36758
UniProt:
C7RJE7
LinkDB
All DBs
Position
complement(4008203..4012414)
Genome browser
AA seq
1403 aa
AA seq
DB search
MKALLDLFRQVTQEEQFDAITIGLASPDKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMAHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAFVVFDPGMTPLARGQLLTEDDYLAKVEEYGDDFYAAM
GAEGIRELLRSIDLGREVEGLRSELETTTSETKSKKFSKRLKILEGFQKSGIKPEWMVLE
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGLPKLMALELFKPFIFNRLEVMGLATTIKQAKKMVETQEAVVWDILEEVIREHP
IMLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLSPANGEPIIVPSQDIVLGLYYATRERINATGEGMLFPDLAEVTRAMQAG
SLDLHARISVRITEYERDGESGWQEKVTRYDTTAGRALLSEILPKGLPFSLIDKPLKKKE
ISKLINAAFRRCGLKETVVFADKLMQNGYRLATRAGISICSDDMLVPAKKREIVAEAEAE
VKEIENQYTNGLVTNGERYNKVVDIWGRTGDKVAKVMMEQLGQVEVTNRQGEKEKQDSFN
SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITTNFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTTNGVTMKALIEGGEVIEALRERIL
GRVTASDVVDPDTEETVIEQGTLISEDHCDLIDQVGIDEVKVRTPLTCDTRYGLCGKCYG
RDLGRGSPVNVGEAVGVIAAQSIGEPGTQLTMRTFHVGGAASRAAVASQVETRSAGVVRF
TATMRYVTSAKGEKIVITRSGEILITDDNGREREKHKVPYGSTLQVVDGQAVKAGARLAS
WDPHTRPIIAEYSGLVKFENVEEGVTVAKQIDEVTGLSTLVVIDPKRGGKAPSKGLRPQV
RLFDPAGDEVKMHGSDHPVTITFQVGAIINVFDGQQISVGDVLARLPQESAKTRDITGGL
PRVAELFEARTPKDAGMLAEFTGTISFGKDTKGKQRLVITDLDGITHEYLILKDKHVLVH
DGQVVNKGESIVDGAPDPHDILRLLGVEALAIYITDEVQDVYRLQGVKINDKHIEVIVRQ
MLRRVNVLDPGDTKFIKGEQVERAHLLDENDGMLAEGKLPATYEHVLLGITKASLSTDSF
ISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHATRKKNAAGEDIA
AGSGWLEEDLARSEENAQDAPVG
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcactgcttgatttgttcagacaggtgacgcaggaagagcagttcgatgcgatc
accatcggtctcgcatcgccggacaagatccgctcgtggtcctacggcgaagtgaagaag
cctgagacgatcaactatcgtaccttcaagccggaacgcgacggcttgttctgtgccaag
atttttggcccgatcaaggattacgagtgcctttgcggcaagtacaagcggctcaagcat
cgtggtgtgatctgcgagaagtgcggcgtcgaagtgacgctcgccaaggttcgtcgcgag
cgcatggcgcatatcgaacttgccagcccggtcgcgcatatctggtttctgaaaagcctg
cccagtcggctgggcatggttctcgacatgacactgcgcgacatcgagcgcgtcctctat
ttcgaggccttcgtcgttttcgatccgggcatgacgccgctggcgcgcggccagttgctg
accgaggatgactacctggccaaggtcgaggagtatggcgacgacttctacgccgccatg
ggggccgaagggattcgcgagttgttgcgctcgatcgatctcggacgtgaagtcgagggt
ttgcgctcggagctcgagacgaccacctcggagaccaagagcaagaaattctcgaagcgt
ctgaagattctcgaaggcttccagaagtcggggatcaagcccgagtggatggtgctcgag
gtgctaccggtcttgccgcccgatctccgcccgctggtgccgctcgacggcggacgtttc
gctacctcggatctcaacgacctctatcgtcgggtgatcaaccgcaacaaccgcttgaag
cgtctgctcgaactcaaggcgccggagatcatcgtacgcaacgagaagcgcatgctccag
gaagcggtggactcgctgctcgacaacggccggcgtggcaaggcgatgaccggtgccaac
aagcgccccctcaagtccctggcggacatgatcaagggcaagggtggtcgtttccgccag
aacctgctcggcaagcgcgtcgactactcggggcgttcggtgatcgtcgttgggccgcaa
ctcaagctgcaccagtgcggtctgccgaagctgatggcgctcgagttgttcaagcccttc
attttcaaccgtctcgaggtcatgggcttggcgacgaccatcaagcaggcgaagaagatg
gtcgagacgcaggaagcggtggtctgggatatcctcgaagaggtgattcgcgagcatccg
atcatgctcaaccgtgcgccgacgctgcaccgccttggcatccaggccttcgagccgacg
ctgatcgagggcaaggcgatccagttgcatccactggtctgtgccgccttcaacgctgac
ttcgacggcgaccagatggctgtgcacgtgcccttgtccctcgaggcccagatggaggca
cggacgctgatgctcgcctccaacaacgtcctgtcgccggcaaatggcgaaccgatcatc
gttccctcacaggatatcgtcctcggtctctattacgccacgcgggagcgcatcaacgct
accggcgagggcatgctcttccccgatctcgcggaagtgacgcgcgccatgcaggccggt
tcgcttgacctgcacgcccgcatttcggttcgcatcaccgaatacgagcgcgatggcgag
agcggctggcaggaaaaggtgacgcgctacgacactacggccggccgcgcgctgctctcg
gagatcctcccgaaaggcctgcctttcagcctgatcgacaagccgctgaagaaaaaggaa
atctcgaagctgatcaacgccgctttccgccgctgtggtctcaaggagaccgtcgttttc
gccgacaagttgatgcagaacggctatcgcctggccactcgagccggcatttcgatctgt
tccgacgatatgctggtcccggcgaaaaagcgcgagatcgttgccgaagcggaagccgag
gtcaaggagatcgagaaccagtacaccaatggtctggtgaccaatggcgaacgttacaac
aaggtggtggacatctggggccgcaccggcgacaaggttgccaaggtgatgatggaacag
ctcggccaggtggaagtgaccaatcgtcagggggaaaaggaaaagcaggattccttcaat
tccatcttcatgatggccgattccggcgcgcgtggttcggcagcgcagattcgccagttg
gcgggcatgcggggtctgatggccaagccggacggctcgatcatcgagacgccgatcacg
accaacttccgtgagggcctgaacgttcttcagtacttcatctcgacgcacggagcacgc
aagggtctcgcggacaccgccctgaagacggccaactcgggttacctgacgcgccgactg
gtcgacgtgacgcaggatctggtggtcatcgaggatgactgcgggacgaccaatggcgtc
accatgaaagccctgatcgaggggggtgaagtgatcgaggcgctgcgcgagcgcattctc
ggtcgggtcacggcgtcggacgtcgtagaccccgacaccgaggagacggtcatcgaacaa
gggaccctgatcagtgaggatcattgtgatctgatcgaccaggtcggcatcgacgaagtc
aaggtgcgtacgccgttgacctgcgacacgcgctacggcctgtgcggcaagtgttacggg
cgcgacctcgggcgcggttcgccggtaaacgtcggcgaggcggttggcgtgatcgccgca
caatccatcggcgaaccgggaacgcagttgaccatgcgcaccttccacgtcggcggtgcg
gcctcgcgtgccgcagttgccagccaggtcgagacgcgcagtgccggtgtcgtccgcttc
accgccacgatgcgctacgtgaccagtgccaagggcgagaagattgtcatcacgcgctcc
ggcgagatcctgatcaccgacgacaacggtcgcgaacgggagaagcacaaggttccctat
ggctcgacactgcaggtcgttgacggacaggcagttaaagccggcgccagactggccagt
tgggatccccacacgcgcccgatcatcgccgagtactcgggtctggtgaagttcgagaat
gtcgaggaaggcgtcaccgtcgccaagcagatcgacgaggtgaccgggctgtcgacgctc
gtcgtcatcgatccgaagcggggcggcaaggctccgagcaagggcctgcgtccgcaggtg
agactgttcgatcccgcgggtgacgaagtgaagatgcatggcagcgatcacccggtgacc
atcacgttccaggtgggcgcgatcatcaatgtcttcgacgggcagcagatttccgttggc
gacgtgctcgcgcgcctgccgcaggaatcggccaagacgcgagacatcaccggcggtctg
ccacgtgtggcggaactcttcgaagcgcgcacccccaaggacgcgggcatgctggccgag
ttcaccggcaccatttccttcggcaaggacaccaaaggcaagcagcggttggtgatcacg
gaccttgacggcatcacccacgagtacctgatcctcaaggacaagcacgtcctggtgcac
gacggccaggtggtcaacaagggcgagtcgatcgtcgacggtgcgcccgatccccacgac
atcctgcgcttgctgggggtcgaggcgctggccatctacattaccgatgaagtgcaggac
gtctaccgcctgcagggcgtgaagatcaacgacaagcacatcgaggtgatcgttcgccag
atgctgcggcgcgtcaatgtgctcgaccccggagacaccaagttcatcaagggtgagcaa
gtcgagcgtgctcacctgctcgacgagaatgacgggatgcttgccgaaggcaagctgccc
gcaacctacgaacacgtgttgctggggattaccaaggcctcgttgtcgaccgattcgttc
atttccgcggcctccttccaggaaacgacgcgggtgttgaccgaggcggccatcatgggc
aagcgcgacgagttgcgcggactcaaggagaacgtcatcgtcggtcgtctgatcccggcc
gggacgggcctcgcctaccacgctacgcgcaagaagaacgcggcgggcgaggacatcgca
gcgggaagcggctggctggaagaggacttggcgcgcagcgaagagaatgctcaggacgcg
cctgttggttga
DBGET
integrated database retrieval system
