Anaerococcus prevotii: Apre_0941
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Entry
Apre_0941 CDS
T00964
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
apr
Anaerococcus prevotii
Pathway
apr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Apre_0941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apr03019
]
Apre_0941
Messenger RNA biogenesis [BR:
apr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Apre_0941
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
SEN1_barrel
Motif
Other DBs
NCBI-ProteinID:
ACV28969
UniProt:
C7RHK8
LinkDB
All DBs
Position
1004232..1005914
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AA seq
560 aa
AA seq
DB search
MQNDKKLRIIPLGGLQEVGKNCTLVEYGNDMIMIDCGLTFPDAEMLGVDIVIPDFTYVEE
NKNKLRGIFVTHGHEDHIGAIPYFLKNIDTNVYCSKLTKGLLENKFKEHGLNPNKIKMVN
VNNTVKVGSLSAEFIRVSHSIPDACSIAVKSPVGTVIFTGDFKMDFTPIDNDPTDIQRLA
ELGRKGVLALFADSTNVEREGYSLSEKTVGDTFIQIFGRAKSRIIVATFASNLHRVQQII
YAAERYNKKVALSGRSMLNNVRIASELGYLKVKSNTLIDMKNIKNYADDEIVVLSTGTQG
EPLSALTRMANREHKQINLNETDTVILSSSAIPGNEMAINNTINNLTKIGCKIIYSSLAK
VHASGHACQEEIKLMYQLVTPKYLIPAHGEVRQLQKHAEIAEDMGQPKENILIGKNGDVY
EFTKKHGAINGRVQAGNILVDGSGIGDVGNIVLKDRKHLSEDGLVVVSITFDKHTQQLLA
GPDIVSRGFVYVKENQDIIENAKDIVLRSIKKCADKEIRAISQIKYKIREDLKSYIYNEL
GRDPMILPVISELESNESYK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgacaaaaaattaagaataatccctcttggagggttacaagaagtaggtaaa
aactgtacattggtagaatatggaaatgatatgatcatgatagattgtggattgaccttc
cctgatgctgaaatgttgggagtagatatagtaattccagattttacctatgttgaagaa
aataaaaataaacttagaggaatatttgtaactcatggtcacgaggaccatattggagct
ataccatatttcctaaagaacattgatacaaatgtatattgttcaaagctaactaagggc
ttattagaaaataaatttaaagagcacggtttaaatcctaacaaaattaagatggtaaat
gtaaataatactgtaaaagttggatctttgagtgctgaatttattagagtgagccactca
atacctgatgcttgctcaatagctgtgaagtctcctgttggaacagtaatatttactggt
gactttaagatggacttcactccgattgataatgatccaacagatattcaaagacttgca
gaattaggacgaaaaggagtattagccctatttgcggatagtacaaatgttgaaagagaa
ggatactccctaagtgagaaaactgtaggggatacctttatacaaatatttggaagagct
aagtcaagaataatcgttgctacttttgcatcaaaccttcatagggttcaacaaattatc
tatgcagcagaaagatacaataagaaagtggccctatctggtaggtcaatgctcaataac
gtaagaattgccagtgaattaggatatctaaaagtaaaaagcaatactctaattgatatg
aaaaatatcaaaaactatgctgacgatgaaattgtagttctatcaacaggaacccaaggt
gaacctctatcagcacttactagaatggctaatagagaacataaacaaataaatttaaat
gaaactgacactgtaatcctatcatcatcagcaattccaggaaatgagatggcaattaat
aatactataaacaatctaacaaaaataggttgtaagattatttattcctctcttgctaaa
gtacatgcttcaggacacgcttgccaagaagaaattaaattgatgtatcaattagttaca
ccaaaataccttattccagcccacggtgaagtaagacagttacaaaagcatgccgaaata
gctgaagatatgggtcagcctaaggaaaatattttgattggtaaaaacggcgatgtttat
gaatttacaaaaaaacatggagctattaatggcagagttcaagctggtaatatcctagtt
gacgggtctggaattggcgatgttggtaacattgttctaaaggatagaaaacacttatct
gaagatggattagttgttgtttcaataacctttgataaacatactcaacaattactagct
ggtcctgatattgtatctcgtggtttcgtttatgttaaagaaaatcaagatatcatagaa
aatgcaaaggatatagtattaagatcaattaaaaaatgtgcggataaggaaattcgagct
ataagtcagattaaatacaagattagagaggacttgaaatcttatatttataacgaatta
ggtcgtgatccaatgatactaccagttatatctgagttggagagtaatgaatcgtataaa
taa
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