Entry |
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Name |
(GenBank) DEAD/DEAH box helicase domain protein
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KO |
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Organism |
apr Anaerococcus prevotii
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:apr00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Apre_1083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:apr03019]
Apre_1083
03009 Ribosome biogenesis [BR:apr03009]
Apre_1083
Enzymes [BR:apr01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Apre_1083
Messenger RNA biogenesis [BR:apr03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Apre_1083
Ribosome biogenesis [BR:apr03009]
Prokaryotic type
rRNA helicases
Apre_1083
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
1159799..1161409
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AA seq |
536 aa
MKFNELNIGNEILRAIDDLGYEKPSPIQEESIPHLLEGNDLIGKSQTGSGKTAAFAIPII
ENIEANGITQALILCPTRELCIQVSKEIEKLYKYKKEIKILSVYGGSHIVRQIKSLKKGV
EIVVGTPGRLMDLMRRKVLKLDQLKTVVLDEADEMFDMGFRDDMKFILDRTNPNRQTCFF
SATMGPEIQEFSKLYQTNPYEVKIKSKEVTVDRIDQYYIKLKESMKEEALMRLLEIHKAN
LAIVFCNTKRKVDRLVESLTKKNYLVDGLHGDLKQSSRDQVMKKFRNKTIQILVATDIAA
RGLDVDDVDIVFNYDLPQLDEYYVHRIGRTARAGKSGLSFSLISGRDNNRLRQIENYTKA
NIKQMPVPTLVQMDRQSDLRLIEDISSKLDKNEDLSREKDILIRLMEKGYDPFMICQVLL
KDKLDINNNHEKLEGIDLKSEKKSKSKSNNKTKKKYDKEMTTLFMNRGKIDNFTKDKIIK
ALARMAKVPKDKIGQIRIQKTYSFIDIEKPEAFKAIRAIDNKKISSKKVKIEESNK |
NT seq |
1611 nt +upstreamnt +downstreamnt
atgaaatttaatgaattaaatataggaaatgaaattttaagggcaattgatgatttaggc
tacgaaaagccaagtcccatccaagaagagtctatcccccaccttttggaagggaatgat
ctaataggaaaatctcaaacaggaagcgggaaaactgcggccttcgccataccaattata
gaaaatatcgaagcaaatggaataactcaagccctcatcctctgtccaacaagagagctt
tgtatacaagtatcaaaagaaatcgaaaagctttataaatacaagaaagaaatcaaaatc
ctttctgtctatggtggaagtcatatagtaaggcaaatcaagagcctaaaaaaaggagta
gaaattgtagttggtactcctggaagactgatggatcttatgagaagaaaggtcttaaag
ctcgaccaacttaaaacagttgtcttggatgaggctgacgaaatgtttgatatgggcttt
agggatgatatgaaattcatccttgataggacaaatcccaatagacagacttgtttcttt
tcagcaactatgggacctgaaatccaagaattttctaagctttatcaaactaatccctac
gaagtcaaaataaaatctaaagaagtaactgttgataggatcgaccaatattatattaaa
cttaaagaatctatgaaggaagaagccttgatgcgacttctagaaatccataaggcaaat
cttgctatcgtattttgtaataccaagagaaaagtcgacaggcttgtagaaagtctcacc
aagaaaaactacctagtagacggccttcatggagatctcaaacaaagtagtcgtgaccaa
gtcatgaagaagtttagaaataaaaccatccaaatccttgtagcgacagatatagctgct
cgtggtcttgatgtggatgatgtagatattgtctttaactatgacctacctcagcttgac
gaatactatgtccacaggattggaagaacagccagagctggcaaaagcggtctaagcttt
tccctaatctcaggtcgtgataataataggctaaggcaaatcgaaaattataccaaggcc
aatataaaacagatgcccgtcccaacccttgtccaaatggataggcaaagcgaccttcgt
cttatagaagatatttcatctaagcttgataaaaatgaagacctcagtagagaaaaagat
atactaataagacttatggaaaaaggctatgatccatttatgatctgccaggtcttactt
aaagataagctagatattaataataaccacgaaaagcttgaaggaattgaccttaaatcg
gagaagaaatctaagagtaagtcaaataataaaactaaaaagaaatacgacaaggaaatg
acaactctcttcatgaacaggggtaagattgataatttcaccaaggataagataataaag
gccctagcaagaatggccaaagtcccaaaggataaaataggccaaatcaggattcaaaaa
acctatagttttatagatatagaaaagcctgaagcctttaaggcaattagggcaattgat
aataagaaaatatctagcaaaaaagttaaaatagaagaatcaaataaatag |