KEGG   Anaerococcus prevotii: Apre_1083
Entry
Apre_1083         CDS       T00964                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
apr  Anaerococcus prevotii
Pathway
apr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:apr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Apre_1083
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apr03019]
    Apre_1083
   03009 Ribosome biogenesis [BR:apr03009]
    Apre_1083
Enzymes [BR:apr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Apre_1083
Messenger RNA biogenesis [BR:apr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Apre_1083
Ribosome biogenesis [BR:apr03009]
 Prokaryotic type
  rRNA helicases
   Apre_1083
SSDB
Motif
Pfam: DEAD Helicase_C DbpA CMS1 ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: ACV29110
UniProt: C7RHZ9
LinkDB
Position
1159799..1161409
AA seq 536 aa
MKFNELNIGNEILRAIDDLGYEKPSPIQEESIPHLLEGNDLIGKSQTGSGKTAAFAIPII
ENIEANGITQALILCPTRELCIQVSKEIEKLYKYKKEIKILSVYGGSHIVRQIKSLKKGV
EIVVGTPGRLMDLMRRKVLKLDQLKTVVLDEADEMFDMGFRDDMKFILDRTNPNRQTCFF
SATMGPEIQEFSKLYQTNPYEVKIKSKEVTVDRIDQYYIKLKESMKEEALMRLLEIHKAN
LAIVFCNTKRKVDRLVESLTKKNYLVDGLHGDLKQSSRDQVMKKFRNKTIQILVATDIAA
RGLDVDDVDIVFNYDLPQLDEYYVHRIGRTARAGKSGLSFSLISGRDNNRLRQIENYTKA
NIKQMPVPTLVQMDRQSDLRLIEDISSKLDKNEDLSREKDILIRLMEKGYDPFMICQVLL
KDKLDINNNHEKLEGIDLKSEKKSKSKSNNKTKKKYDKEMTTLFMNRGKIDNFTKDKIIK
ALARMAKVPKDKIGQIRIQKTYSFIDIEKPEAFKAIRAIDNKKISSKKVKIEESNK
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgaaatttaatgaattaaatataggaaatgaaattttaagggcaattgatgatttaggc
tacgaaaagccaagtcccatccaagaagagtctatcccccaccttttggaagggaatgat
ctaataggaaaatctcaaacaggaagcgggaaaactgcggccttcgccataccaattata
gaaaatatcgaagcaaatggaataactcaagccctcatcctctgtccaacaagagagctt
tgtatacaagtatcaaaagaaatcgaaaagctttataaatacaagaaagaaatcaaaatc
ctttctgtctatggtggaagtcatatagtaaggcaaatcaagagcctaaaaaaaggagta
gaaattgtagttggtactcctggaagactgatggatcttatgagaagaaaggtcttaaag
ctcgaccaacttaaaacagttgtcttggatgaggctgacgaaatgtttgatatgggcttt
agggatgatatgaaattcatccttgataggacaaatcccaatagacagacttgtttcttt
tcagcaactatgggacctgaaatccaagaattttctaagctttatcaaactaatccctac
gaagtcaaaataaaatctaaagaagtaactgttgataggatcgaccaatattatattaaa
cttaaagaatctatgaaggaagaagccttgatgcgacttctagaaatccataaggcaaat
cttgctatcgtattttgtaataccaagagaaaagtcgacaggcttgtagaaagtctcacc
aagaaaaactacctagtagacggccttcatggagatctcaaacaaagtagtcgtgaccaa
gtcatgaagaagtttagaaataaaaccatccaaatccttgtagcgacagatatagctgct
cgtggtcttgatgtggatgatgtagatattgtctttaactatgacctacctcagcttgac
gaatactatgtccacaggattggaagaacagccagagctggcaaaagcggtctaagcttt
tccctaatctcaggtcgtgataataataggctaaggcaaatcgaaaattataccaaggcc
aatataaaacagatgcccgtcccaacccttgtccaaatggataggcaaagcgaccttcgt
cttatagaagatatttcatctaagcttgataaaaatgaagacctcagtagagaaaaagat
atactaataagacttatggaaaaaggctatgatccatttatgatctgccaggtcttactt
aaagataagctagatattaataataaccacgaaaagcttgaaggaattgaccttaaatcg
gagaagaaatctaagagtaagtcaaataataaaactaaaaagaaatacgacaaggaaatg
acaactctcttcatgaacaggggtaagattgataatttcaccaaggataagataataaag
gccctagcaagaatggccaaagtcccaaaggataaaataggccaaatcaggattcaaaaa
acctatagttttatagatatagaaaagcctgaagcctttaaggcaattagggcaattgat
aataagaaaatatctagcaaaaaagttaaaatagaagaatcaaataaatag

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