Anaerococcus prevotii: Apre_1406
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Entry
Apre_1406 CDS
T00964
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
apr
Anaerococcus prevotii
Pathway
apr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Apre_1406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apr03400
]
Apre_1406
DNA repair and recombination proteins [BR:
apr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Apre_1406
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Apre_1406
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
DnaJ_CXXCXGXG
AAA_33
AAA_16
nSTAND3
AAA_21
nSTAND1
APS_kinase
nSTAND6
AAA_23
ATPase
NACHT
cobW
ATPase_2
SLFN-g3_helicase
Viral_helicase1
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
ACV29429
UniProt:
C7RE16
LinkDB
All DBs
Position
complement(1509713..1512520)
Genome browser
AA seq
935 aa
AA seq
DB search
MTEIKIKGARTNNLKNVDINLPRDKMIVFTGLSGSGKSTLAFDTIYAEGQRRYVESLSSY
ARQFLGNVDKPDVDSIEGLSPSISIDQKTTNRNPRSTVATVTEIYDYYRLLYARVGDAYC
PVCGRPIEAQSIDQMVDRVKELPERTRIQILAPVIRGKKGAHKRALENIQKDGYVRVVID
GEKYDLAEDIDLSKTKKHDISVVVDRIVIKDGIDARLTDSIETALGLADGLVIIDVIGED
EILLSSKLACPEGHVSLPEITPNMFSFNAPIGMCPDCNGLGFHLQVDRDLVIPDYDLSIN
EGAIDPYATSTKESYYYEMIRAIADHYKFSHDDPIKKAPKKMIEDILHGTNYDLSFVFDS
HFSGRKRYTGPFEGAIKNIYDRYQRTGSDAQKKKFREYMSEEECDTCHGDRLKPEVLAIK
VGGVNISELTRLSVEKSVDFFAKLELSPMKAKIADLIVKEIKARLSFLNDVGLTYLTLNR
AAATLSGGESQRIRLATQIGSGLVGVCYVLDEPSIGLHQRDNDKLIAALRNLTDIGNTLI
IVEHDEDTMKEADYIVDIGPKAGVHGGEIVAKGSLRDIMNSKKSITGDYLAGRKKIPVPK
ERRTSDEYIEIKGAAVNNLKNIDVKIPLGVLTTVTGVSGSGKSSLVNEILYKQATKKINK
TKIRAGKHKEILGLDKIDKVIAIDQSPIGRTPRSNPATYTKVFDAIRDVFAMTNEAKMKG
YDKGRFSFNVKGGRCEACKGDGTIKVDMMFLPDVYVPCEVCHGKRYNRETLEVKYKGKDI
SDVLDMTVEEGIEFFQNHPSIVRKLQTLYDVGLGYIKIGQPSTELSGGEAQRVKLATELA
KVSTGKTLYILDEPTTGLHMADVHKLIEVLNRLVDQDNTVVVIEHNLDVIKVSDNLIDLG
PEGGDGGGTLVASGTPEEIAKNKKSYTGQYLKKIL
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
ttgacagaaattaagataaaaggagcaagaaccaacaatctcaaaaacgtagatatcaat
cttccaagagataagatgattgtatttacaggcctttcaggctctggcaagtctactctt
gcctttgataccatctatgcggaaggacaaaggcgttatgtcgaaagcttatcttcctat
gctaggcagtttttgggcaatgtagataagccggatgtggactccattgagggactttcc
ccatccatatcaatcgaccagaagacaactaacaggaacccaagatctacagtagcaacg
gttacagaaatctacgattattataggctcctttacgcaagagtaggagatgcctattgt
ccagtctgtggtagaccgatagaagcccaaagtatagaccagatggtcgatagggtaaag
gaacttcctgaaagaacgagaatccaaattcttgccccagtaatcagaggaaaaaagggg
gctcacaaaagagccctagaaaatatccagaaggatggatatgtaagggtcgtaatcgat
ggagaaaagtacgacttggcagaagatatcgacctatccaagaccaaaaagcacgatatt
tctgtcgttgtagataggattgtgatcaaggatggaatcgatgcgagacttacagattcc
atagagacagccctaggacttgcagatggcctagttatcatagatgtgataggagaagat
gagatactcctatcttctaagctcgcctgtccagaaggccacgtatccctcccagagatt
acaccaaatatgttctccttcaacgccccaatagggatgtgtcccgactgtaatggactt
ggttttcaccttcaagtcgacagggaccttgttataccagactacgacctatctataaac
gagggggctattgacccttatgcaacttccaccaaggagagctattattatgagatgata
agagctatagcagatcattacaagttctcccatgatgatccaataaaaaaggctcctaag
aaaatgatcgaagatatactccatggtacaaattacgacctaagttttgtcttcgatagt
catttttctggtaggaaaagatacaccggaccctttgaaggagcaatcaaaaatatctac
gaccgctatcaaaggacaggatctgatgctcaaaagaaaaagtttagagaatatatgtcg
gaagaagaatgtgacacctgccatggagatagacttaagccagaagtcctcgctatcaag
gtcggaggagtaaatatttcagagcttacaagactttccgtagaaaagtccgtagacttt
ttcgctaaactcgaactttctccaatgaaggcgaagattgcagaccttatagtaaaggaa
attaaggcgaggctctccttcctaaatgacgtgggacttacctatttgaccttaaatagg
gcggcagcgaccttatccggtggagaaagccagagaatcagactagctactcaaatagga
tctggtcttgtaggagtttgctatgtccttgatgagccttccataggacttcaccagaga
gataacgataagctcatagcagccctaagaaatctcacagatattggaaacaccctaatc
atagtagaacacgacgaagatactatgaaggaagctgactatatagttgatattggacca
aaggcaggagttcacggtggagagattgtcgccaagggaagtcttcgtgatataatgaat
tccaaaaagtcaatcacaggagactatctagctggaaggaaaaaaatcccagttcctaag
gaaagaagaacaagcgatgaatatatagaaataaagggggctgcggtaaacaacctcaaa
aacattgacgtcaaaatccccctaggagtccttacaactgtaactggagtatcaggatca
gggaagtcttccctagtaaatgaaattctctataagcaagctacaaagaagattaacaag
accaagataagagctggtaagcacaaggaaatcctaggtcttgataagattgataaggta
atagccatagaccaatccccaattggaagaactccaaggtcaaacccagctacctacacc
aaggtcttcgatgccataagggatgtcttcgccatgaccaatgaggccaagatgaaaggc
tatgataaggggagattttcctttaacgttaagggaggaaggtgcgaggcctgcaaggga
gatggaacaatcaaggtggatatgatgttcttgccagatgtatacgttccatgcgaagtc
tgccacggcaaaagatacaacagggaaacccttgaagttaaatacaagggcaaagatata
tcagacgtcctagatatgactgtagaagaaggaatagaatttttccaaaaccatcctagc
atagtaagaaagctccaaactctctacgatgtaggcctaggctatattaaaataggccaa
ccatccacagagctatctggaggagaggctcaaagggtgaaactagcaacagaacttgct
aaagtctccacaggaaaaaccctctacatcctagacgaaccaacaacaggccttcacatg
gcagacgtccacaagctaatagaagttctaaacagactagtagatcaggataatacagta
gttgtaattgagcacaacctagacgtaataaaagtctccgacaacctaatagacctaggt
ccagaaggaggagacgggggaggtactctagtagcgagcggtactccagaagagatagca
aaaaacaaaaagtcctatactgggcagtatcttaaaaagatattatag
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integrated database retrieval system
