Ancylobacter pratisalsi: G3A50_10985
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Entry
G3A50_10985 CDS
T06476
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
apra
Ancylobacter pratisalsi
Pathway
apra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G3A50_10985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apra03019
]
G3A50_10985
03009 Ribosome biogenesis [BR:
apra03009
]
G3A50_10985
Enzymes [BR:
apra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G3A50_10985
Messenger RNA biogenesis [BR:
apra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G3A50_10985
Ribosome biogenesis [BR:
apra03009
]
Prokaryotic type
rRNA helicases
G3A50_10985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
ASFV_J13L
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIB34174
UniProt:
A0A6P1YR04
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All DBs
Position
2319267..2321219
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AA seq
650 aa
AA seq
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MPFMTTNPALARALAERDYNNPTPVQLAVLAPEASARDLLVSAQTGSGKTVAYGLAMAET
LLGTEERFASAAAPLALVVAPTRELALQVQREFVWLYAGTGARIVSCVGGMDPRQEQRLL
NQGAHIVVGTPGRLRDHLERGRLDLAALRVAVLDEADEMLDLGFREDLEFILDATPPERR
SLLFSATMPRGITALAKRYQRDALRIEVASAEGGHADIEYRTIRVAPTEVEHAVVNVLRF
YDTPSAIVFCNTREAVRRLHAMLQERQFSAVALSGELSQTERNHALQALRDGRARVCVAT
DVAARGIDLPNLGLVIHADLPNDAESLQHRSGRTGRAGRKGVSVLLVPPFRRRRTEDLMR
GLGIAPAWSGPPTAEDIRKLDHERMLSDPLLTEEPNEEDASAARTLLAAHSAEHLAAALV
RLYRAGLPAPEEVADPGEPRAARDRSADREFGGPSGSGGGGSSWFRLNVGRRNNADPKWL
LPLICRRGNVTRRDIGVIRIFDEETAFEVGLAAADRFSKAVRKANADDVVIEPLPGGPSN
ARSERPARGKPMRDKPLRDKPHTDRPHQDRPVQDRPRYEKPIREKTFRDEAPWKKPADGK
GEHGRAAFDRPREAKRPAPGAGDRKPKDARPATFEGKPKGKPKGKPPRRP
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
gtgcccttcatgacgacgaacccggcgcttgcccgtgccttggccgaacgggactacaac
aacccgacgccggtgcagcttgccgtcctcgcgcccgaggcgtcggcgcgcgatcttctg
gtgtcggcccagaccggttcgggaaagaccgtcgcctatggactggccatggccgaaacg
ctgctgggcaccgaggagcgatttgcttccgccgccgcgccgctggcgctggtcgtggcg
cccacgcgcgaattggcgctgcaggtccagcgcgaattcgtctggctctatgcgggaacg
ggcgcgcgcatcgtgtcctgcgtcgggggcatggatccgcgacaggagcagcggctgctg
aaccagggcgctcatatcgtcgtcggcacgccgggacgcctgcgcgaccatctggagcgc
ggccggctcgacctcgccgcgcttcgcgtcgccgtgctcgacgaggccgacgagatgctc
gacctcggcttccgcgaagaccttgagttcattctcgacgccaccccgccggagcggcgc
agcctgctgttctccgccaccatgccgcgcggcatcaccgcgctggccaagcgctaccag
cgcgacgcgcttcgcatcgaggtggcaagcgcggaaggcggccacgccgacatcgagtat
cgcaccatccgcgtcgccccgaccgaggtcgagcacgccgtcgtcaacgtgctgcgcttc
tacgacacgccgagcgccattgtgttctgcaatacgcgcgaggcggtgcggcgcctgcac
gccatgctgcaggagcggcagttttccgccgtcgcgctctccggcgagcttagccagacc
gaacgcaaccatgcgctgcaggccctgcgggacggccgggcgcgggtctgcgtcgccacc
gacgtggcggcgcgcggcatcgacctgcccaatctcggcctcgtcatccatgccgacctg
ccgaacgacgccgaaagcctgcagcatcgcagcggccgcaccgggcgggcggggcgcaag
ggcgtgagcgtgctgctggtgcctccgttccgtcgtcgccggaccgaggacctgatgcgc
ggccttggcatcgcgcccgcctggtcgggcccgccgaccgccgaggatatccgcaagctc
gaccatgagcgcatgctcagcgatcccctgctgaccgaagagccgaacgaggaggatgcg
agcgcggcccgtacgctgctcgccgcccacagcgccgagcatctcgcggccgcgctggtg
cgtctctaccgcgccggcctgccggcgccggaagaggttgccgatcccggcgagccgcgc
gccgcgcgggatcgttcggcggaccgcgagttcggcggcccctcgggcagcggtggcggc
ggaagcagctggttccggctcaatgtcggtcgccgcaacaacgccgatccgaaatggctg
ctgccgctgatctgccggcgcgggaacgtgacgcgcagggatatcggcgtcatccgcatc
ttcgatgaggaaacggccttcgaggtcggcctcgccgccgccgaccgcttcagcaaggcg
gtgcgcaaggcgaatgcggacgacgtggtgatcgagccgttgccgggcgggccgtcgaat
gcccgttcggaacgtcccgctcggggcaagccgatgcgcgacaagcccttgcgcgacaaa
ccgcatacggacagaccgcaccaggatcgaccggttcaggacaggccgcgttacgaaaaa
cccatccgggaaaagaccttccgcgacgaggccccgtggaagaagcccgccgacggcaaa
ggcgaacatggcagggcggcgttcgatcggccgcgcgaggccaagcggccggcgccgggc
gcgggggaccgcaagccgaaggacgcgcgtcccgcgaccttcgagggcaagccgaaaggc
aaacccaagggaaagccgccgcgccgcccctga
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