Ancylobacter pratisalsi: G3A50_19640
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Entry
G3A50_19640 CDS
T06476
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
apra
Ancylobacter pratisalsi
Pathway
apra03030
DNA replication
apra03430
Mismatch repair
apra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G3A50_19640 (dnaE)
03430 Mismatch repair
G3A50_19640 (dnaE)
03440 Homologous recombination
G3A50_19640 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apra03032
]
G3A50_19640 (dnaE)
03400 DNA repair and recombination proteins [BR:
apra03400
]
G3A50_19640 (dnaE)
Enzymes [BR:
apra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G3A50_19640 (dnaE)
DNA replication proteins [BR:
apra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G3A50_19640 (dnaE)
DNA repair and recombination proteins [BR:
apra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G3A50_19640 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
McdB_C
DUF655
HROB
T2SSK
Motif
Other DBs
NCBI-ProteinID:
QIB35672
UniProt:
A0A6P1YRD4
LinkDB
All DBs
Position
4210506..4213940
Genome browser
AA seq
1144 aa
AA seq
DB search
MATSDVGFVHLHVHSSFSLLEGALTIGKLADLAKKDRQPAIALTDTGNLFGALEFSEKLA
GAGIQPILGCALAIDFPGSQPRGPASAQRPRIVLLAASEEGWGNLMALVSRSFLDTAADG
APLIKMEWLEGLTGGLIALTGGPSGPIDRALVAGSPDHAEQRLTALKELFGDRLYVEVQR
HDVAEERRVEGALIELAYRLDLPLVAANEPFFAAEADYEAHDALICIAEGRIVADPDRRQ
LSPQHRFRTRAEMMALFADLPEALANTVEIARRCAYRPRTVKPILPRFTMERDEAEELRV
QAEEGLRQRLAVHGPAPGLSEKDYTDRLAFELGIIEKMKFPGYFLIVSDFIKWAKAQGIP
VGPGRGSGAGSLVAYSLTITDLDPLRFGLLFERFLNPERVSMPDFDIDFCQERRDEVIRY
VQQRYGRDQVAQIITFGTLQARGVLRDVGRVLEMPYGQVDKLCKLVPQNPASPVTLTQAI
EGEPRLQAERDANPVVKRAFDIATRLEGLNRHASTHAAGIVIGDRPLSQLVPLYRDPRSD
MPVTQYNMKWIEQAGLVKFDFLGLKTLTVLQTAVRLVAQRGVELDLSTIPLDDKTSYAML
TRGETVGVFQVESAGMRRALVDMKPDRLEDIIALVALYRPGPMANIPVYCAVKNGQEQAV
YVHPALEASLKETYGVIIYQEQVMQIAQTLSGYSLGEADLLRRAMGKKIRAEMDKQRERF
VDGAVERGVPKAKASEIFDLLAKFADYGFNKSHAAAYALVAYQTAYMKANYCTEFLAASM
TLDMGNTDKLAEFRQEAQRLGIEVLPPSVNHSGREFAVKDGRILYALAAIKGVGGHAVDA
IVEARGDKPFTSLSDFASRINAKALNKRTMESLVNAGAFDALEPNRARAAAAVDTVLAHA
ASVGAEAASGQVNLFGGPAQAAELPIPAAAPWLPADRLQKEYDAIGFFLTGHPLDDYAKA
LDKLRVQRWTDFTRSVRAGSIAGRLAATVVSRQERRTKSGSKMGIIGLSDPSGQFEAILF
SEALAQYRELLEPGKALLLQVSAELQGEDVRARIQTAEPLDAATARMQKGMRIFLRSSDP
LDSVAARLGSLAGGRGDGEVAFVLLLGERGATEVEVKLPGRFNLSPQIAGAIKAVPGVVA
VEAH
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcagatgtcggattcgtgcacctgcacgtccattcctccttctcgctgctg
gagggcgcgctcaccatcggcaagctggccgacctcgccaagaaggaccgccagcccgcg
atcgcgctcaccgataccggaaatctcttcggggccctcgaattttccgagaaactggca
ggggcgggcatacagccgattctgggatgtgcgctggcgatcgacttcccgggttcccag
ccgcgcggtcccgccagcgcgcagcgcccgcgcatcgtgctgctcgccgcctccgaggag
ggatggggcaatctgatggcgctggtgtcgcgctcatttctcgacaccgcggcggacggc
gcgccgctgatcaagatggaatggcttgaggggctcaccggtggcctcatcgccctcact
ggcggtcccagcggtcccattgaccgcgcccttgtggcggggagcccggatcacgccgag
caacggctgaccgcgctcaaggagctgttcggcgaccgtctttatgtcgaggtgcagcgt
cacgacgtggcggaagagcgccgcgtcgaaggcgcgctgatcgagctggcctatcgtctg
gacctgccgctggtggccgcgaacgagccgttcttcgcggcggaggccgactacgaggct
catgacgcgctgatctgcatcgcggaaggccgcatcgtcgccgacccggatcgccgccag
ctctcgccgcagcaccgtttccgcacccgcgccgagatgatggcgctgttcgcggatctg
cccgaggcgctggcaaataccgtcgaaatcgcgcgccgctgtgcctaccggccgcggacc
gtcaagccgatcctgccgcgcttcaccatggagcgcgatgaagccgaggagctgagggtg
caggccgaggaggggctgcgacagcgtctcgccgtgcatggcccggcgccgggcctgagc
gaaaaggactatacggaccgtctggcctttgagcttggcatcatcgagaagatgaagttt
ccgggctatttccttatcgtgtctgactttatcaaatgggcgaaggcgcaggggatcccc
gtggggccgggccgtggttcgggcgccggctcgctcgtcgcctattcgctgaccatcacc
gaccttgatccgctacgcttcggcttgctgttcgagcgcttcctgaaccccgagcgcgtg
tcgatgccggacttcgatatcgacttctgccaggagcgtcgggacgaggtgatccgctac
gtgcagcagcgctacgggcgggaccaggtcgcgcagatcatcaccttcggtacgcttcag
gcgcgcggcgtgctgcgcgacgtcggccgcgtgctggaaatgccctacggccaggtcgac
aagctgtgcaagctggtgccgcagaacccggccagtccggtgacgctgacgcaggccatc
gagggtgagccccgccttcaggccgaacgcgacgccaatcccgtggtgaagcgggcattc
gacatcgcgacccggctcgaagggctgaaccggcacgcgtccacccacgccgccggcatt
gtgatcggcgaccggccattgtcgcagctcgtgccgctgtaccgcgatccgcgctccgac
atgccggtgacgcagtacaacatgaagtggatcgagcaggcggggctggtgaagttcgac
ttcctgggcctgaagacgctcaccgtgctgcagaccgccgtgcgcctcgtcgcgcaacgg
ggcgtcgagctcgatctgtcgaccatcccgctcgacgacaagacaagctacgccatgctc
acgcgtggtgagacggtgggcgtgttccaggttgaaagcgcgggcatgcggcgcgcgctg
gtcgacatgaagcccgaccggctggaggacatcatcgccctcgtggcgctctatcgtccg
ggcccgatggcgaacattccggtctactgcgcggtcaagaacggccaggagcaggcggtc
tatgttcaccccgcgctcgaagccagcctgaaggaaacctacggcgtcatcatctaccag
gaacaggtgatgcagatcgcgcagacgctgtccggctattcgctgggcgaagcggacctg
ctgcgtcgcgccatgggcaagaagatccgcgccgagatggacaagcagcgcgagcgcttc
gtcgatggcgcggtggagcgcggcgtgccgaaggcgaaggcgtcggagatcttcgatctg
ctggcgaagttcgccgactacggcttcaacaagagccacgctgccgcctatgcgctggtc
gcctaccagaccgcctatatgaaggcgaactactgcaccgagttcctcgccgcctcgatg
acgctcgacatgggcaacaccgacaagctggcggaattccgccaggaggcgcaaaggctg
ggcatcgaggtgcttccgccctccgtcaatcattccggccgcgaattcgcggtgaaggac
gggcgcattctttatgcgctcgccgcgatcaagggcgtgggtgggcacgcggtcgacgcc
atcgtcgaggcgcgcggtgacaagcccttcaccagcctttcggatttcgcctcgcgcatc
aacgccaaggcgttgaacaagaggaccatggagagccttgtgaatgcgggtgccttcgac
gcgctggagccgaaccgggcccgcgcggcggcggccgtcgacaccgtgctggcacatgcc
gcgtccgtgggcgcggaagccgcttcggggcaggtgaacctgttcggcggtccggcgcag
gcggccgagttgccgattccggcggctgcgccctggctgccggcggaccggctacagaag
gaatacgacgccatcggcttcttccttaccggccatccgctcgacgattacgccaaggcg
ctcgacaagctccgggtgcagcgctggaccgatttcacgcggtcggtgcgggcaggttcg
attgccgggcgtctggccgcgacggtggtgagccggcaggaacggcgcaccaagagcggc
agcaagatgggcatcatcgggctctccgatccgtccggccagttcgaggcaattctcttc
tccgaggcgctggcgcagtaccgcgaactgctggaaccggggaaggcgctgctgctgcag
gtgtccgccgagcttcagggagaagacgtgcgggcccgaatccagaccgcagagccgctc
gacgcggcgacggcccgcatgcagaaaggcatgcgcatattcctgcgctcgtccgatccg
ctggacagtgttgccgcacggctcggctcgctcgcgggcgggcgaggggacggcgaggtt
gctttcgtgctgctgctgggcgagcgcggggcgacggaggtcgaggtgaagctgccgggc
cgtttcaacctgtcgccgcagatcgccggcgccatcaaggcggtgccgggcgtcgtcgcg
gtcgaggcgcattag
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