Abrus precatorius (Indian licorice): 113846096
Help
Entry
113846096 CDS
T07330
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113846096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aprc03021
]
113846096
03036 Chromosome and associated proteins [BR:
aprc03036
]
113846096
Transcription machinery [BR:
aprc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113846096
Coactivators
SAGA/TFTC/STAGA complex
113846096
Chromosome and associated proteins [BR:
aprc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
113846096
STAGA complex
113846096
TFTC complex
113846096
SAGA complex
113846096
SLIK complex
113846096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Ge1_WD40
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
WD40_like
WD_LRWD1
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
113846096
NCBI-ProteinID:
XP_027329791
UniProt:
A0A8B8JEF3
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MDEDQIEGCVSGYLKDKGFTQKDQLSNTDSSLQPHTLNRTQLERGSARYHDGYGRLRSWA
YRSLDSYKHELLRVLYPVFVHCFMDLVAKGHLQEARNFFNTFREDHEKMHSRDLQKLEVV
ISPTHFEEMEFAHSLRQSKFNIKICGYSYELLLQHLHSMQSTTIIGIINDHINFQVTTGQ
PSSISDDPEAVALAGSIQDVVNQINQKEILWGLLEDSVDDHRDKAGALLSDTEKGEGEAK
EGDNDESKKRSIDGGKQGGSIKKVKKDKAGSATGKNAKPEANAISATPCLKPELPLLIGS
TEVELSILEDLRNRVQLNSVALPSVNFYTFVNTHSGLSCSSISHDGSLIAGGFSDSSVKV
WDLAKLEQPTTSFSQRGNDTSQNEQILGPNSGKRQYTLFQGHSGPVYATTFSPTGDFILS
SSADKTIRLWSTKLNANLVCYKAHNYPVWDVQFSPAGHYFASCSHDRTARIWSMNTIQPL
RIMAGHLSDVDCVQWHSNCNYIATGSSDKTVRLWDVQSGECVRVFIGHRSMILSLAMSPD
GRYMASGDEDGTIMMWDLSSGCCVTPLIGHTSCVWTLAFSCEGSLLASGSADCTVKFWDV
TTGIKVPRNEEKSGNTNRIRSLKSLPTKSSSVYSLQFSRRNLLYAVGAPAKCS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagatcaaatagaaggttgtgttagtgggtacctaaaggacaaagggtttacg
caaaaggatcaactctccaacaccgattcctctcttcaacctcacactctcaatcgcact
caattggagagaggttctgctagataccatgatgggtatggtaggctgagatcatgggca
tacaggtcacttgactcatacaagcatgagttgttacgtgtgctttatcctgtattcgtc
cattgcttcatggatcttgtggcaaaagggcatcttcaggaagctcggaactttttcaat
acctttcgtgaagaccatgaaaagatgcactcacgagaccttcaaaagttagaagtggtt
atttctcctactcattttgaggaaatggagttcgctcattcgcttaggcagagcaaattc
aacataaagatatgtgggtattcttatgagcttctgttgcaacatctccacagtatgcaa
tccaccactataattggtattatcaatgatcatattaacttccaagttacaactggacaa
cctagctcaatttctgatgatccagaagctgttgccctcgctggaagcatccaggatgta
gtaaaccagataaatcagaaagaaatactttgggggttgcttgaagattctgtagatgac
cacagagataaagctggggccttgctttcagacacagaaaagggagaaggggaagccaag
gaaggggataatgatgagagtaagaaaaggtcaattgatggaggaaagcaaggtggttcc
ataaaaaaggtaaaaaaggacaaggctggaagtgcaacagggaaaaatgcaaaacctgaa
gctaatgctatatcagcaacaccttgcctgaaaccagaactccccttgctcataggttca
accgaggtagaactgtctatcctggaagatttaaggaatcgtgtacaattgaatagcgtt
gccctgccttctgttaacttctacacatttgtcaatacacatagtggtttaagctgttca
tcaatatcgcacgatggatcgctaattgctggtggattttctgactcatcagtaaaggtt
tgggatttagcaaaacttgaacagcccaccacttctttctcacagagaggaaatgacaca
tcacaaaatgaacaaattcttggaccaaatagtgggaaaaggcagtacacattgtttcaa
ggtcattcagggccagtctatgcaaccacttttagtcccactggggattttattctttcc
tcttcagcagacaaaacaattcgattatggagtacaaagcttaatgccaatcttgtttgt
tacaaggctcacaattaccctgtctgggatgttcagtttagtccggctgggcattatttt
gccagttgttcacatgacagaacagctaggatttggtccatgaacactatacagccttta
agaataatggcagggcacttgtcagatgtcgattgtgtgcagtggcattccaactgcaac
tacattgctactggctctagtgacaaaacagttcgactatgggacgtgcagagtggggaa
tgtgttcgggttttcattgggcacaggagtatgattttgtctttggcaatgtctcctgat
ggtcgctatatggcatctggtgatgaagatggcacaatcatgatgtgggacctctctagt
ggctgttgtgtcacccctttaatcggtcacacctcatgtgtttggacacttgctttcagt
tgtgaaggttctcttctagcatctggatcagctgattgcactgtaaaattttgggatgta
actacgggtataaaagttccaaggaatgaagaaaaaagtgggaatactaacagaatcaga
tcattgaaaagcctgccaaccaaatcatcttcagtttactctttgcagttttctcgaagg
aatcttctttatgcagttggagctcctgcaaagtgtagttga
DBGET
integrated database retrieval system
