Abrus precatorius (Indian licorice): 113846783
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Entry
113846783 CDS
T07330
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113846783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113846783
03012 Translation factors [BR:
aprc03012
]
113846783
Enzymes [BR:
aprc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113846783
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113846783
Translation factors [BR:
aprc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113846783
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
R3H
HA2_C
Ank_2
AAA_22
HA2_N
Ank_5
AAA_19
ATPase
Ank
nSTAND3
ResIII
AAA_23
Ank_4
Rad17
T2SSE
AAA_16
Ribosomal_L27_C
AAA_7
NPHP3_N
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
113846783
NCBI-ProteinID:
XP_027331217
UniProt:
A0A8B8JIJ2
LinkDB
All DBs
Position
Unknown
AA seq
1154 aa
AA seq
DB search
MTKKRENKGEPLHRQNLKVDEVTRIRISQILEQFRASKDEVYKFDASLSNQERALVHQLS
LKMGFRSKSSGLGKDRRVSVQKIKKKVDTNNGFERLPQFTFSEESKWVLGDLFSHYPPGD
GNLWEIIGENSDTIEKTKQKKDDMFGRPSMTKAEIARKLEALASRMNSVSNLRQIIEDRS
KLPIASFKDVITSTVESHQQVVLISGETGCGKTTQVPQFILDHVWGKGEVCKIVCTQPRR
ISATSVSERIATERGETIGENVGFKIRLESRGGRQSSIVLCTTGVLLRVLVSKGSHWSKK
GPGKDDGSGITHIIMDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATIDAERFSQYF
GSCPIIHVPGFTYPVKTFYLEDVLSIIKSSNDNHLDSTTCSIPIINRELSEEDKLSVDEA
INLAWSNDDWDLLLELVSSEGSPELFNYQHSLTGLTPLMVFAGKGRVGDMCMLLSFGANC
NLRSKDGMTALEIAERENQLEVAEIIKKHMDGDFSNSMEEKKLLDKYLATVNPELVDDVL
IEQLIRKICIDSTDGGILIFLPGWDDINRTRERLLASHFFKNSSKFMLISLHSMVPSVEQ
KKVFKRPPHGCRKIVLSTNIAETAITIDDIVYVIDTGRMKEKSYDPYNNVSTLQSSWISK
ASAKQREGRAGRCQPGICYHIYSKLRATSLPDFQIPEIRRIPIEELCLQVKLLDPSCKIE
EFLGKTLDPPVFESIRNAIVVLQDIGALSTDEKLTQLGEKFGSLPVHPLICRMLFFAILM
KCLDPALTLACASDCRDPFTLPMLPEEKKRAATAKSELAGLYRGCGDQFAIIAVFECWNN
AKKMGLEARFCSQYFVSSSVMHMLSGMRRQLQTELVRNGFIHEDVSSYSVNAYDPGVLHA
VLVAGLYPMVGRFLPNKSGKRLIIETSGGDKVRLHNHSTNFKLSFKKNLDQTLIVYDEIT
RGDGGMNIRNCTVVGPLPLLLLSTEIAVAPAKDNDDGDDDDEGGSEDEVGSEDGMEFDTK
SSGCCEDKLMSSPDNMVRIIMDRWLYFRSTAIDVAQLYCLRERLSAAILYKVTHPRNTLP
PILGDSMHAIARILSCDGCTGLPLTLDNVDTLTTMVNATNLGKPEAEMKRLGKRPKGSFP
EYDRNQTCGPSSKA
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaaaagagagaacaagggagaaccacttcaccgtcaaaatctcaaagttgat
gaagtcaccaggattcgcatttcccagattttagaacagtttcgagcttccaaagatgaa
gtgtacaagtttgatgctagtttgtccaaccaagagcgtgctttggtccatcaattatcc
ctcaaaatggggtttagatctaaaagttctgggcttgggaaggataggagagtgtctgtt
caaaaaatcaaaaagaaggttgacaccaataatgggtttgagaggcttcctcaattcaca
ttttctgaggagtcaaagtgggtactaggcgatttattttctcattatccacctggtgat
ggaaacttgtgggagataattggagaaaatagtgacactattgagaaaacaaaacaaaag
aaggatgatatgtttggcaggccctctatgactaaagctgaaattgctaggaaattggaa
gcccttgcctctagaatgaacagtgtctctaacttgagacagatcattgaagacagatct
aagcttccaattgcatctttcaaggatgttattacatcaaccgttgaatctcaccagcag
gtagttctcatatctggtgagactggttgtggaaagactacgcaggttcctcaatttatt
ttggatcatgtgtggggtaagggagaggtttgtaaaatagtatgtactcagcctcggcgt
atctctgcaacttcagtttccgagagaattgccactgagagaggagagacaattggagaa
aatgttggatttaagatacggttagaaagcagaggtggaaggcaatcatcaatcgtgcta
tgcaccactggagttctattaagggtcttggtttctaaaggttctcattggtcaaagaaa
gggcctgggaaggatgacggttctggcatcactcacataattatggatgaaattcatgaa
agggatcgatactcagacttcatgttggcaatcatcagagacatgctcccttcatatcct
cacctacgtctgatattaatgagtgctaccattgatgctgagcgattttctcaatatttt
gggagctgtccaatcatccatgttccagggttcacttatccggtcaaaactttctatttg
gaggatgtactttctattataaaatccagtaatgataaccatcttgatagtaccacatgt
agtattccaataataaatcgtgagctaagtgaagaagacaagctttctgttgatgaagct
attaatttggcttggtctaatgatgattgggacctgctcttagagttagtttcttctgaa
ggaagcccagaactttttaattaccaacattctttaactggccttactccgttaatggtg
tttgccggaaaaggcagagtgggtgatatgtgcatgctcttatcttttggggcaaattgc
aatttaaggtccaaagatggaatgactgcactggagattgctgaaagggaaaaccagctg
gaagttgctgaaataattaagaagcacatggatggtgatttttccaactccatggaagag
aaaaagttacttgataaataccttgcaacagttaacccggaacttgttgatgatgttctg
atagagcagctgataaggaaaatatgcattgattcaacagatggggggatccttattttt
cttccaggatgggatgatataaacagaacacgtgagagattgcttgcatcacattttttc
aagaattcctcgaagtttatgcttatatctctgcattcgatggttccatctgtggagcaa
aagaaggtttttaagcgtccacctcatggttgccgcaaaattgtactatcaaccaatatt
gctgaaacggctatcaccattgatgatatagtgtatgtcatagacactggacggatgaag
gaaaaaagttatgatccttataacaatgtgtctactcttcagtcatcttggatctcaaaa
gcaagtgctaagcagcgagagggacgtgctggccgctgtcaacctggtatatgctatcat
atatattcaaagcttcgagcaacttccttgcctgattttcagattccagaaattaggaga
atacctattgaggagctttgtctgcaggtgaagttacttgatccaagttgcaaaatagaa
gaatttctaggcaagacattagatcctccagtttttgagtccatacgaaatgctattgta
gttcttcaagatattggggcattgtcaactgatgaaaaactcacccagctaggggagaag
tttggttctcttcctgttcacccattaatctgcagaatgcttttttttgctatcttaatg
aaatgtcttgatccagctttaactcttgcatgtgcatctgattgtcgagatccatttaca
cttccaatgttacctgaagaaaagaagagagctgcaactgccaaatctgagcttgctggt
ttatatcggggttgtggtgatcagtttgccataatagctgtatttgaatgctggaataat
gcaaagaaaatgggtctagaagctcgtttttgttctcagtattttgtgtcttcaagtgtc
atgcacatgttatctggcatgcgtaggcaactccaaacagagctagttcgaaatgggttt
attcatgaagatgtttcaagttacagtgtgaatgcatatgaccctggtgtgctccatgca
gttttggtagcgggtttgtatccaatggttgggagattcttaccaaataaaagtggaaaa
aggcttataattgaaacatcaggcggtgataaagttcgcttgcacaatcattccacaaat
tttaagttgtcattcaagaaaaatttagatcaaactttaattgtgtatgatgagattact
cgtggtgacgggggtatgaacataaggaattgcactgttgttggaccacttcccctcttg
ctactttcaacagagattgctgttgctccagcaaaagataatgatgatggggatgatgat
gatgagggagggagtgaagatgaagttggaagtgaagatgggatggagtttgataccaag
tccagtggatgctgtgaggataagttgatgtcttctcctgataatatggttaggataatc
atggaccgttggctttattttcgttcaacagcaattgatgttgctcagctatattgcttg
agagagagattatcagcagcaattttatacaaagtgacacatccaaggaacactcttcct
cccatactaggggactccatgcatgctattgctcgaattctgtcttgtgatggatgcact
ggcttgccactgaccttagataatgtggacacattgaccactatggtaaatgcaacaaat
ctaggcaaaccagaagcagagatgaaacgtttgggtaaaagaccaaaagggtcctttcca
gagtatgataggaaccagacctgtggaccttcttctaaagcatag
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