Abrus precatorius (Indian licorice): 113849089
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Entry
113849089 CDS
T07330
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8 isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113849089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113849089
03036 Chromosome and associated proteins [BR:
aprc03036
]
113849089
Enzymes [BR:
aprc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113849089
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
113849089
mRNA degradation factors
5'-3' decay
Decapping complex
113849089
Chromosome and associated proteins [BR:
aprc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113849089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Aldedh
Motif
Other DBs
NCBI-GeneID:
113849089
NCBI-ProteinID:
XP_027334499
UniProt:
A0A8B8JT56
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MNNNRARYPPGMGIGRPGFNPNPNPNPNHPFQARPPYQQQPHQQQYVQRHLVQQPQQQQQ
WLRRDSNVVDEVEKTVQSEAVDPSSQDWKARLKIPPPDTRYRTEDVTATKGNEFEDYFLK
RELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNV
IQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGR
ILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIHFLPRTRQILMFSATFPVTVK
DFKDRYLQKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVN
RVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNV
VINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHID
QAIYCR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaatagagcgaggtacccacctggaatgggtattggacgaccgggttttaac
ccgaacccgaatccaaatccgaatcacccttttcaggcaaggccaccgtaccagcaacaa
ccgcaccaacagcaatatgtgcagaggcatttggtgcaacagccacaacaacaacaacag
tggctgaggagggactccaacgttgttgacgaggtcgagaagaccgtgcagtctgaagcc
gttgacccaagttcacaagattggaaagcaagactaaagattccaccacctgatacgcgc
tataggacagaggatgtaacagcaactaaaggaaatgaatttgaggattactttttgaag
cgtgagcttctcatgggaatatatgagaagggttttgaaaggccttcccccatccaagaa
gaaagcattccaattgctcttactggtagtgacattcttgctagggccaaaaatggaact
ggcaaaacagctgcattttgcattcctgcattggaaaaaattgatcaggacaataatgtt
attcaagttgttattctggtcccaacccgagaattggctttgcaaacatctcaagtgtgc
aaagagcttgggaagcatttgaaaattcaagttatggttaccacaggtggtaccagccta
aaagatgatattatgcgcttatatcaaccagttcatttactagttggaactccaggaaga
atattagatcttgctaagaagggtgtttgtattttgaaagattgctctatgcttgtcatg
gatgaggctgataagcttctgtccccagagttccaaccttctgtagagcagttgattcat
tttcttcctagaacccgtcaaatcctgatgttttcagctacatttcctgtcactgtaaag
gacttcaaagataggtatcttcagaaaccttatgtcatcaaccttatggatgagctaact
ctgaagggtattacacaattttatgcatttgtggaagagagacaaaaagtccactgtcta
aatactctattttctaagctgcaaataaatcagtctatcatcttctgcaattcagtgaat
cgggttgaactccttgcaaagaaaatcacagaacttgggtattcatgtttctatatacat
gcaaagatgttgcaagatcatcgtaatagagtatttcatgacttccggaatggtgcatgt
cgaaatcttgtttgtactgatctttttactaggggaatagacattcaagcagttaatgtt
gttattaattttgatttcccgaagaactcagagacttatttgcatagggttggtcgatca
gggaggtttgggcaccttggtttagcagtgaacctgattacctatgaggatcgctttaat
ttatataggattgaacaagaacttggaactgaaataaagcaaattcctccgcacattgat
caggcaatttattgccggtga
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