Abrus precatorius (Indian licorice): 113849276
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Entry
113849276 CDS
T07330
Name
(RefSeq) uncharacterized protein LOC113849276 isoform X1
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113849276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113849276
03400 DNA repair and recombination proteins [BR:
aprc03400
]
113849276
Enzymes [BR:
aprc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113849276
Messenger RNA biogenesis [BR:
aprc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
113849276
DNA repair and recombination proteins [BR:
aprc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
113849276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Helicase_Sgs1
Motif
Other DBs
NCBI-GeneID:
113849276
NCBI-ProteinID:
XP_027334854
UniProt:
A0A8B8JU47
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MDTMPSLLKKYFGFSDFRPYQKEVIEKIIEKRDCLVVMATGSGKSLCYQVPPLVVNKTGI
VVSPLISLMQDQVMALKQRGIKAEYLGSAQKDSTVHSKAERGQFDILFMTPEKACTIPTS
FWSNLLKVGISHFSVDEAHCISEWGHDFRVEYKHLDKLREVLLDVPFVGLTATATEKVQF
DIISSLKMNNPYVMVGSFDRANLFYGVKLFNRGQAFIDELVLGISKEVASGGSTIIYCTT
IKDVEQIFKTLAEAGMEAGMYHGQMNAEAREESHRLFVRDELKIMVATIAFGMGIDKPNI
RQVIHYGCPKSVESYYQESGRCGRDGIASVCWLYYTRSDFAKGDFYCRDLKTEKQRKAVM
ESLLAAERYCMLTTCRRKFLLEYFGENFSADRCGNCDNCKVSKKERDLSREAFLLMACIH
SCNGKWGLNMPIDILRGSRAKKILDAQFDKLPVHGLGKTYPANWWKALGHQLISQGYLKE
IVSEMYRTISVNSKGEQFLASSRPDYQPPLVLSLTAEMLGEEENRSTQEFKTLASSTPEG
FSEAEGQLYQMLLEERLKLARSVGTAPYALCGDQTIRKIALTRPSTKARLANIDGVNQHL
VTKYGYHFLQVIKKLSQGLKLSLDGEASLVTNEVRKVSPVANKLKLTSAKFDAWKMWQED
GRSIPEIANYPGRSAPIKEQTVVEYLLEAAQEGLPFNWTRFCEMIGLTQEIISEIQNAIS
KVGSDKLKPIKNELPENVNYQHIKTFLLMRKSGISLEEIQSGSHPTGKDEPVNNASTLSH
PTLETHCTEKQHEDDISARSLREKCDLKINEVPSPSLNGCQVQKHALASEGEFTSKRQKL
CETEKINLTKLKATECSVVEWLKNLDEGASLTDILEYFKGSNEDSVIELLNCLECDFSIY
KKGNMYRAM
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggacactatgccttcccttctcaagaaatactttgggttttcagattttcggccttat
cagaaagaagttattgagaaaattattgagaaaagggattgtttggtagtcatggctact
ggtagtgggaagtccttgtgctatcaggtacctcccttggttgttaacaagactgggata
gttgtaagccctctgatatcattgatgcaagaccaggtcatggctttgaaacaacggggc
attaaagctgaatatcttggaagtgctcagaaggattccactgtacactctaaagctgaa
cgtggtcaatttgacattctgttcatgactcctgaaaaggcatgcacaattcctaccagt
ttctggtccaacttgctaaaggttggaattagtcatttttctgttgatgaagcccattgt
atatcagaatggggacatgattttagggtggaatacaagcatttagataagttacgtgag
gttctgttagatgttccttttgttggtctaactgccactgctactgaaaaggttcaattt
gacatcatcagttccctgaagatgaataatccttatgttatggttggttcatttgatcga
gcaaatcttttctatggtgtcaaactatttaaccgcggacaagcttttattgatgagctt
gtgctaggaatttcaaaagaagttgctagtggtggttcaactataatttactgcacaaca
atcaaagatgtagagcagatattcaagacacttgcagaagcaggtatggaggcaggaatg
taccatggccaaatgaatgcagaagctcgagaggagtctcatagattatttgttagagat
gaactgaaaatcatggtggccaccattgcctttggcatgggcatagataaacctaacata
aggcaagtgattcattatggttgccctaagagtgtagagtcctactaccaggaaagtggg
cgatgtggtagagatggtatagcttctgtttgttggctttactacacaagaagtgacttt
gcaaagggagatttttattgtcgagatttaaaaacagaaaagcaaagaaaagctgtcatg
gagtcattgctggctgctgaacgctactgtatgctgacaacttgcagaagaaagttcttg
cttgaatactttggggaaaatttttcagctgatagatgtggaaactgtgataactgcaaa
gtttcaaagaaggagcgtgacttgtcaagagaggcatttcttctgatggcttgcattcat
tcatgcaatggaaaatggggcctcaatatgcccattgacatcctgcgtgggtctcgagcc
aagaaaattcttgatgcccagtttgacaagcttccggttcatggactggggaaaacttat
ccagcaaattggtggaaagctcttggacatcaattgatttctcaaggttatttgaaggag
attgttagtgagatgtatagaactataagtgtcaattcaaaaggagagcaatttttggcc
tcttctagaccagattatcaacctcccttggttttgtcattgactgctgaaatgcttgga
gaagaggaaaatagaagcacgcaagaattcaaaactttagcctcttcaacaccagagggt
ttttcagaggctgagggacagctctaccaaatgcttttagaagaaagattaaagctggca
agaagtgttggaacagctccatatgctctatgtggtgatcaaacaatcagaaaaattgct
ttgacaaggccatccacaaaagcaagactcgcaaacattgatggtgtgaatcagcaccta
gtaacaaaatatggatatcattttcttcaagttattaagaaactgtctcaaggattaaag
ctatcattggatggggaagcaagtttggtaactaatgaagtaaggaaagtatctccagta
gccaacaaattgaagttgacatcagcaaagtttgatgcatggaaaatgtggcaagaagat
ggtcgttctattccagagattgctaactatccaggtagatcggctccaataaaggaacaa
actgttgttgaatatctgctggaagctgctcaagaaggcttacctttcaattggactaga
ttctgtgagatgataggactgacccaagagatcatatcagaaattcagaatgctatttca
aaggttggatcagacaagctgaagcctataaaaaatgagttgccagaaaatgtaaattat
cagcatatcaagacatttttgttgatgcgaaagtctggaatatccttagaagaaattcaa
tctggaagtcacccgactgggaaagatgaacctgtaaataatgcttcaactttgtcacac
cctaccttagaaacacactgcacagaaaagcaacatgaagatgacatttctgccagaagt
ttgagggaaaaatgtgacttaaaaatcaatgaggttccttctccatctctcaatggttgc
caggtacagaagcatgcattagcctctgagggtgaattcacaagcaaacgacaaaaactg
tgtgaaacagagaaaataaatctaactaaattgaaagctactgagtgttctgttgtagag
tggttgaagaaccttgatgaaggggcttctttgactgatattttggagtacttcaaagga
tccaatgaagactccgtgattgaattgttgaattgccttgaatgtgacttttcaatatac
aagaaaggcaatatgtatagggctatgtaa
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