KEGG   Abrus precatorius (Indian licorice): 113849512
Entry
113849512         CDS       T07330                                 
Name
(RefSeq) THO complex subunit 3 isoform X1
  KO
K12880  THO complex subunit 3
Organism
aprc  Abrus precatorius (Indian licorice)
Pathway
aprc03013  Nucleocytoplasmic transport
aprc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aprc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113849512
  09122 Translation
   03013 Nucleocytoplasmic transport
    113849512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aprc03019]
    113849512
   03041 Spliceosome [BR:aprc03041]
    113849512
Messenger RNA biogenesis [BR:aprc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     113849512
Spliceosome [BR:aprc03041]
 Complex C
  Other components
   EJC/TREX
    113849512
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    113849512
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_NOL10_N Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_TEP1_C DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd eIF2A Beta-prop_Vps41 Beta-prop_EML WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_HPS5 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Tricorn_2nd TRM82_WD Beta-prop_NUP159_NUP214 PAC11 WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_Nup120_160 Beta-prop_ACSF4 TP_0598_N WD_LRWD1 DUF7099 Beta-prop_WDR11_1st CNH
Other DBs
NCBI-GeneID: 113849512
NCBI-ProteinID: XP_027335264
UniProt: A0A8B8JVA3
LinkDB
Position
Unknown
AA seq 313 aa
MDEQIPFKNLHSREYSGHKKKVHSVAWNCIGTKLASGSVDQTARIWHIEPHGHGKVKDIE
LKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGT
HVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGEKFFLTTGNGTVEVLSYPSL
QPHDTLMAHTAGCYCIAIDPIGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISF
NYTGDLIASASEDLFIDISNVQSGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQA
DEGVFRIFGFESA
NT seq 942 nt   +upstreamnt  +downstreamnt
atggacgaacaaatcccatttaagaatctccatagcagagagtattcgggtcacaagaag
aaggtgcattctgtggcctggaattgcattggcacaaaacttgcttctggttctgtggat
caaaccgctcgaatctggcatattgagccacacgggcatggtaaggtcaaagatattgaa
ttgaagggtcatactgatagtgttgatcagctatgctgggaccccaaacatgctgatctg
attgcaactgcatccggcgacaagactgttcgattgtgggatgctcgtagtggaaaatgc
tctcaacaggcagaacttagtggggagaatatcaacatcacctacaaacctgatgggact
catgtagctgtaggtaatagggatgatgaattaacaatactggatgttcggaagtttaag
ccaattcataggcgcaagttcaattatgaggtcaatgagattgcttggaatatgacgggt
gaaaagttctttctaacaacaggaaatgggactgtggaagtactgtcttacccatctctt
caacctcacgatactctcatggctcataccgctggttgttattgtattgcaattgaccca
ataggaagatattttgctgttggaagtgctgattcccttgtcagcctttgggatatctca
gagatgctctgtgtgcgtaccttcacaaagctggaatggcctgtccggacaattagcttc
aattatactggcgatcttattgcttctgcaagtgaagacttgttcattgatatttcaaat
gttcaatctggaagaacagtgcatcaaattccttgtagggctgctatgaacagtgttgag
tggaatcccaagtacaatttgcttgcatatgctggtgatgacaaaaataagtatcaggct
gatgaaggtgtttttcgaatatttggttttgaaagtgcttag

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