Abrus precatorius (Indian licorice): 113853664
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Entry
113853664 CDS
T07330
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH10 isoform X1
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113853664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113853664
03041 Spliceosome [BR:
aprc03041
]
113853664
03009 Ribosome biogenesis [BR:
aprc03009
]
113853664
03016 Transfer RNA biogenesis [BR:
aprc03016
]
113853664
Enzymes [BR:
aprc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113853664
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
113853664
Spliceosome [BR:
aprc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113853664
Complex C
U4/U6.U5 tri-SnRNP related factors
113853664
Ribosome biogenesis [BR:
aprc03009
]
Eukaryotic type
Pre-60S particles
Helicases
113853664
Transfer RNA biogenesis [BR:
aprc03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
113853664
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
nSTAND3
ATPase_2
DUF7579
Motif
Other DBs
NCBI-GeneID:
113853664
NCBI-ProteinID:
XP_027339967
UniProt:
A0A8B8K861
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MEKESPLTLGKRRESELTDDTSKPKKARSSERTCVHEVAVPSGYVSSKDEQLHGTLSNPF
YDGPMAKSYSFTLDPFQQVSIACLERNESVLVSAHTSAGKTAVAEYAIAMSFRDKQRVIY
TSPLKALSNQKYRELSQEFQDVGLMTGDVTLSPNATCLVMTTEILRGMLYRGSEVLKEVA
WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICNIHKQPCHVV
YTDFRPTPLQHYVFPMGGSGLYLVVDENEQFREDNFLKLQDTFSKQKLGDANRGAKGNGR
IGKGGSGSAGSDIYKIVKMIMERKFQPVIIFSFSRRECEQHAMSMSKLDFNTEEEKDTVE
HVFQNAVLCLNEEDRSLPAIELMLPLLQRGIAVHHSGLLPVIKELVELLFQEGLVKALFA
TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDERGICIIMIDE
QMEMNNLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRNSFHQFQYEKALP
DMGQRVAKLEQEVALLDASGEAEVSEYHKLKLEMAQLEKKMMSKIIRPEMILYFLVPGRL
IKVREGGTDWGWGVVVNVVKKPSGGGYIVDTLLHCSPGSNENSSRPKPCPPRPGEKGEMH
VVPVQLPLISALSKLRIFIPPDLRPLEARQSILLALQELGNRFPQGLPKLNPVKDMNVQD
SEIVELVNQIEELEKKLFAHPMHKHQDVDQIKCFERKAEVNHEIQQLKTKMRDSQLQKFR
EELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAAL
ASCFIPGDKSSEQIQLRTELARPLQQLQDSARRIAEIQHECKLDINVNEYVESTVRPYLM
DVIYSWSKGANFADVIQMTDIFEGSIIRSARRLDEFLNQLHAAANAVGEADLEKKFAAAS
ESLRRGIMFANSLYL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaatcgccgttgacgctgggaaagcgaagagaatcagaactcactgacgac
acttcaaagccaaagaaagctcgcagttcggaacgcacgtgcgttcacgaggtagccgtt
ccgagcggctacgtctcaagcaaggacgaacaacttcacggtactctctcgaaccctttc
tacgacggtcccatggcaaagtcgtattccttcaccctcgaccctttccagcaagtctcc
attgcatgccttgaacgaaatgagtccgttttggtgtccgcacacacttccgccggcaaa
acggcagttgcagagtacgccatcgcaatgtcgtttagggacaagcaaagagtcatctac
acttccccactcaaagcactgagcaaccagaagtaccgagaactcagccaagagtttcaa
gacgttggattaatgactggcgatgtaacgctctctcctaacgccacgtgtcttgtgatg
acaacggagattctgaggggaatgttgtataggggttcagaggttttgaaagaagtggcg
tgggttatattcgatgagattcattacatgaaggaccgagaaagaggtgttgtttgggaa
gagagtataatctttttgccacctgctattaagatggtttttctttcggctactatgtcc
aatgccactgagtttgcggagtggatttgtaacattcataagcaaccttgtcatgtggtg
tacactgatttcagacctactcctttgcagcattatgttttccccatggggggtagtggg
ttgtatttggttgtggatgagaatgagcagttcagggaggacaattttctgaagctgcag
gatactttttcaaagcagaaactgggtgatgcgaataggggtgctaaaggcaatggacga
attgggaaaggtggctctggttctgctggttcagacatttacaagattgttaagatgatc
atggaacggaaattccaacctgttatcatttttagcttcagtagaagagagtgtgaacag
catgcaatgtctatgtccaaacttgacttcaataccgaagaggaaaaggatacagtagag
catgtttttcaaaatgcagtgctctgtttgaatgaagaagacaggagcttgcctgccatt
gagctgatgttgccacttcttcagcgggggattgctgtccatcattctggccttctacct
gttatcaaagaattggttgaacttcttttccaggaaggtcttgtgaaagccctctttgct
actgaaacatttgcgatgggtttaaatatgcctgcaaaaactgttgtattcactgctgtt
aagaagtgggatggtgacagtcaccggtatattggatctggtgaatatatacagatgagc
ggaagggctgggcgtcgtggcaaagatgagcgtggaatttgtatcataatgattgatgag
cagatggaaatgaataacctcaaagacatggttttgggtaaacctgctcctttagtcagt
acattcaggcttagctactattcaattttaaatttgatgagccgagcagaaggccaattc
actgctgagcacgtaataagaaattcatttcatcaatttcaatatgaaaaggccttacct
gatatggggcaaagggtggcaaagctggagcaggaagtagccttgcttgatgcatcgggg
gaggctgaagtatctgaatatcataaactaaaactggaaatggcacagctggagaagaag
atgatgtcaaaaataataaggcctgaaatgattctttattttcttgtccctggtcgattg
atcaaagtaagagagggtggaactgattggggctggggtgttgtagtcaatgttgttaag
aaaccttcgggtggtggttatatagttgacactttacttcattgttcacctggttcaaat
gaaaacagctcgcggccaaaaccatgtccaccccgccctggagagaaaggtgaaatgcat
gtggtccctgttcaattaccattaatctctgctcttagtaaactgaggatatttatacct
cctgatcttcggcccttggaagctaggcaaagtatactgcttgctttgcaggagctgggc
aatcgttttccccaaggtcttccaaagcttaaccctgtaaaggacatgaatgtacaagac
tcagagatagttgaactagtcaatcaaatagaggaacttgagaaaaagttgtttgctcat
cctatgcataagcatcaagacgtggatcaaattaaatgctttgagaggaaagcagaagtg
aatcatgagattcagcaactgaaaacaaaaatgcgggattctcagctacaaaaatttcgt
gaagaactaaagaatcgctcacgagtattaaagaagcttggtcatattgatgctgatggt
gtagttcagttgaagggacgggcagcctgcttgattgacacaggcgatgaactccttgtc
actgaattaatgtttaatggtacttttaatgaccttgatcatcatcaagttgctgccctt
gcaagttgtttcataccaggagataagtcaagtgagcagatacaattgagaacagagctt
gcaaggccactacaacagcttcaagatagtgcaagaaggatagcagagatacaacatgaa
tgcaaattggatataaatgtgaatgaatatgtggagtcaacagtaaggccatacttgatg
gatgtgatatactcttggtcaaagggagcaaactttgcagatgtgatacaaatgactgac
atctttgaggggagtatcattcggagtgctagaaggcttgacgagtttttaaatcagttg
catgctgctgctaatgcagtaggagaggctgacttggagaagaaatttgcagcagcaagc
gaaagccttcgacgagggattatgtttgcaaattccctgtatctgtga
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integrated database retrieval system
