Abrus precatorius (Indian licorice): 113855976
Help
Entry
113855976 CDS
T07330
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113855976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113855976
03012 Translation factors [BR:
aprc03012
]
113855976
Enzymes [BR:
aprc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113855976
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113855976
Translation factors [BR:
aprc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113855976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RVT_3
DEAD
R3H
HA2_C
Helicase_C
Ank_2
nSTAND3
HA2_N
AAA_19
AAA_22
Ank_5
AAA_7
ResIII
ATPase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
113855976
NCBI-ProteinID:
XP_027343408
UniProt:
A0A8B8KJG2
LinkDB
All DBs
Position
Unknown
AA seq
1710 aa
AA seq
DB search
MANIDEAGPSQQLPNSFDNEPSEALMEKTSKILNHFVASKDQVYKFDGNLSGEERSAVDR
LCHLMGLGVRFCGTGDELKICVYKVENGAPDQVQVITSRKRKRREEPESCSHRKAINVEF
NRISQALENFLASNNEVYNFETKLSHQECQLVSQLCEKMGFKYTLSWHGIKQQVSIRKTK
KVVDNTTLSEILPHVTCSEVSDQGDMLKNSQKEEEPEPPQHQDNIDIESKRALFSQILEK
FLASEDKVYNFEDELSTKERALVVKLSQKMGLNWRFSGRGIRKKASVHKTKKEVDTTKKQ
KKLGPPQPKKLKRTQIFQALENFLASKDEVYKFEANLSPEECVAVNQLSQKMGLRVENSG
SWIKHKVSVHKIKEEIHATTESENLPCFTFSEESKKVLCGSSPCYEHRGEMIGKYGDTTY
STESKEDDIFSRPCMSKHEITKKLENLSAKMKNLPDLKLISEKKSKLPIASFKGVITSTV
ESHQVVIICGETGCGKTTQVPQYILDHMWGNGEVCKIVCAQPRRIYVTSVSERISTERGE
NIGQSVGYKMQLESRGGRQSSIVLCTTGVLLKFLVSKGSHIFKRQSAKDDISSISHIIMD
EIHERDRYSDVMLAILREMLPSNPHLRLILMSANVDAARFSQYFGVCPIIYVPGFTYPVK
TYYLEDVLSIVKSGADNHLDDNHELSEEEKLSLDEAINLALYNDEWCSLLEFVSSKASPK
VLNYQHSLTGLSPLMVFAGKGKVGDMCMLLSLGAKCHLRGKDGLTALEIAEKGNHQEAAE
LLKKHMDNDFCNNKRNNLLDKNFATVNPKVIDVVLIEQLIIKICVDSQDGGILVLLPGRD
EITRTRERLLASPFFGNTSKFRVISLHSMARSIKQRKVYMCATSAYRKIVLSTNIAETAV
SIDDIVYVIDTGLVKEKSYEPYSNVLTLQSSWISKASASQREALAGHCQPGVCYHLYSKV
QAASLPDFQVPEIKRMPIEELCLQVKLLDPSCKIEEFLSRTLDPPGVESIQNAVGVLKEI
GALSVGEQLTQLGKKLGSLAVPLSTSRMLLFSILTNCLDPALTLACVSEYKDPFKHPLLP
DEKEIAAAARSEFASLYGGCGDQFAVIAAFECWQNSKRMGLDSRFCYQYFVSPKTMFILL
GMRRKLAAELSRNGLIHNDISYYCSNAHDPGILQAVLVAWMYPNVGKLLLPNERAKKYIV
KTKSGDNVRLNSLSLNSKFSFKKGYDCSLVVHDEITCSDWGMCIRNCTVVGLLPFFLLSK
EIAVTPAMDYKEGDEVISSPDNIVRVTVDRWLDFESTILDASQIFYLRERLSAAILSKVT
HSKHFLPTDLRVAMDALACVLSCDGLSGIPQTSACVNTLTTTINATDPEGFQIELTNQDA
HKTNPSKVNESASEAIENPNKQTCQNAPIDLACSISMKQTDKNPEGSPTKLINHDDMPSS
RPSISTSKGAENPCDPPNQSTAIGSACSIQPAHINDVATMIDVSSPKDSRSASKCLENPN
RVRWSSSKGGCYRMVAVGWTFPEVGWMKANTDGSYKEREYLAASGGVFRDDTGSWCFGFV
QNHGVICGSSDEAKAIGNYGITLSELWGILAALKLARERGISQLWVETDCAIALEFVLNR
SGLNIDVLAPVVQSILDEMMKEDCTVRLSHCYREGNKVADWLAHYAQSTELGLHVLRAPP
PDCVKFVKNDISGVFKLRAVRAGSRADLKV
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacatcgacgaggctgggccttctcagcagcttcctaattccttcgacaatgaa
ccctcggaggctctcatggaaaagacttcgaagatattgaaccattttgttgcctccaag
gatcaagtgtacaaatttgatggtaacttgtctggtgaagaacggtcagcagtggatcga
ttatgccaccttatggggttaggtgtaagattttgtggaacaggggatgaactgaaaata
tgtgtttacaaagtggagaacggggccccagatcaggttcaggttatcacgtcaaggaaa
aggaagaggagagaggagccagagtcatgtagccataggaaagcaattaatgttgagttc
aacaggatctcccaagcattagaaaattttttagcttcaaataatgaagtgtacaatttt
gaaactaaattgtcgcatcaagaatgtcaattagtgtcccaattatgtgaaaaaatgggt
tttaaatatacactttcttggcatgggattaaacagcaagtatctatccgcaaaacaaaa
aaagtggttgacaacactactttgtctgagattcttcctcatgtcacatgttctgaagta
tcagatcagggtgacatgttgaagaactctcaaaaggaagaggagccagagccacctcag
catcaggataacattgatattgaatccaaaagggctctgttttcccagatattggaaaaa
tttttagcatcagaagataaagtgtacaattttgaagatgaattgtccactaaagaacgt
gccctagtggtgaaattatcccaaaaaatggggcttaattggagattttctgggcgtggg
attagaaagaaagcatctgttcacaaaaccaaaaaggaggttgacaccactaagaaacaa
aagaagctagggccacctcagcctaaaaaattgaaaaggactcagattttccaggcgtta
gaaaattttttagcatcaaaagatgaagtgtacaaatttgaagctaacttgtctcctgaa
gaatgtgttgcagtgaatcaattatcccagaaaatggggcttagagttgaaaattcaggg
agttggattaaacacaaagtatctgttcacaaaataaaagaggagattcatgccactacc
gagtcagagaatcttccttgtttcacattttctgaagaatcaaagaaagtgttatgtggt
tcatcaccttgttatgaacatcggggagagatgattggaaaatatggtgatactacttac
agcacagaatcaaaggaagatgatattttcagcaggccttgtatgagcaaacatgaaatt
actaagaaattggagaacctttctgccaaaatgaagaacctccctgacttgaaactgatc
agtgagaagaaatctaagcttccaattgcatccttcaaaggtgtcattacatcaactgtt
gaatctcaccaggtggttatcatatgtggtgagaccggttgtgggaagaccactcaggtc
ccacaatatattttggatcatatgtggggtaacggtgaggtctgcaaaatagtttgtgct
cagcctagacggatctatgtaacttcagttagtgagagaatctccactgagagaggagag
aatattggacagagtgttggatacaagatgcagttggaaagcagaggtggaaggcaatca
tcaattgtgctgtgtactactggagttctattgaagtttttggtttctaaaggttctcat
atctttaagagacagtctgcaaaggatgacatttctagcattagtcacataattatggat
gaaattcatgaaagggacagatactcagacgtcatgttggcaatcctcagagagatgctc
ccttcaaatccccacctacgtctgatactgatgagtgctaatgttgatgctgcaagattt
tctcaatattttggtgtctgcccaattatctatgttccggggttcacatatccggttaaa
acttactacttggaggatgtactttcgattgtaaaatctggagcagataatcatcttgat
gataaccatgaacttagtgaggaagaaaagctttctctagatgaagccattaatttggct
ttgtataatgatgagtggtgctccctgttagagtttgtttcttcaaaagctagtccaaag
gtcttaaattatcagcattcattaactggcctcagtccattaatggtgtttgctggaaaa
ggtaaagtgggtgatatgtgcatgctcttatctttaggggcaaagtgtcatttaaggggc
aaagatggattgactgcactggagattgctgagaagggaaaccatcaagaagctgctgaa
ttgctgaagaaacacatggataatgatttttgcaacaacaaaaggaacaatttactggat
aaaaattttgcaacagtcaaccctaaagttattgacgttgttctgatagagcagctgata
ataaaaatatgtgttgattcacaagatggaggtatccttgttttgcttccaggtagggat
gaaatcactagaactcgtgaaagattgcttgcatccccattttttggtaacacatcgaag
tttagggtcatatctctgcattcaatggctcgatccattaagcaaaggaaggtttatatg
tgtgcaacatctgcttaccgcaaaattgtgctctctaccaatattgctgaaactgctgtc
agtattgatgatatagtatatgttatagacactgggcttgtgaaagaaaaaagttatgag
ccttatagtaatgtgttaacacttcaatcatcttggatttcaaaggcaagtgctagccaa
cgggaggcacttgctggtcactgtcaacctggagtttgttatcatctatattcaaaggtt
caagctgcttccttgccagattttcaggtccctgaaattaagagaatgcctattgaggag
ctgtgtctgcaggtaaagttgcttgatccaagctgcaaaatagaagagtttctgagccga
acattagatcctccgggtgttgagtctatacaaaatgctgttggagttcttaaagagatt
ggggcattgtcagttggtgaacaactcacccagctaggaaagaagcttggctctcttgct
gttcctctatcaacaagcaggatgcttcttttttccatattgacgaattgccttgatcca
gcattaactcttgcatgtgtgtctgagtataaagacccatttaagcatccacttttacct
gatgaaaaggagatagctgcagctgccagatccgagtttgcttctttatatgggggttgt
ggtgaccagtttgctgtaatagcagcatttgaatgctggcaaaattcaaagagaatgggt
ctagactcgcgattttgttatcagtactttgtctctccaaaaactatgttcattttactt
ggcatgcgtaggaaattagcagcagaactatctcggaatgggcttattcacaatgatatt
tcatattattgctcaaatgcccatgaccctggtattcttcaagcagttctggtagcatgg
atgtatccaaatgttgggaaattgcttttaccaaatgaaagggcaaagaagtatattgtt
aaaactaaaagtggagataatgttcgcttgaatagtctctccttaaattctaagttttca
tttaagaaagggtatgattgctctttagtggtacatgatgagattacttgcagtgactgg
ggcatgtgcattaggaactgtactgttgttggactacttccatttttcctgctttccaaa
gagattgctgttactccagcaatggattataaagagggagatgaggttatctcttctcct
gataatattgttagagtaaccgtagatcggtggcttgattttgagtcaacaatacttgat
gcatctcagattttctacttgagagagcgattatcagcagcaattttatctaaagtgact
cattcaaagcattttcttcctactgatctacgggttgctatggatgccttagcttgtgtt
ctgtcttgtgatgggctttcaggcataccacagacctcagcttgtgttaacacactgact
accactataaatgcaactgatccagaaggattccaaatagagcttacaaatcaagatgca
cacaagaccaatccttctaaagttaatgagtcagcatccgaggccattgaaaatccaaat
aagcaaacttgtcagaatgctccaatagatttggcttgctctatctcaatgaagcaaaca
gataaaaatccagaaggatcccctacaaagcttataaatcatgatgacatgccttcttct
agacctagcatatccacatccaagggtgcagaaaatccttgcgatccaccaaatcagagc
actgcaataggttcagcttgctcaatccagccagcacatataaatgatgttgcaaccatg
attgacgtgtcttctcctaaagatagcagatctgcttccaagtgcctagaaaacccaaat
cgagtaaggtggagttcttctaaaggggggtgctatcgaatggttgcagttgggtggacc
tttcctgaagtgggatggatgaaagctaatacagacgggtcttataaggaacgagaatat
cttgctgcctctggaggagtttttcgggatgacacaggttcttggtgctttggttttgta
caaaatcatggagtcatatgcggatcatcggatgaggctaaagctattggtaattacggt
attacattgagtgagctgtggggtatactggctgccctcaagcttgctagggagaggggc
atttcgcagctgtgggttgagactgattgtgctattgcattggagtttgttttgaataga
tcggggttgaatattgatgttttggcccctgtcgtccagtccatattagatgagatgatg
aaggaagattgcacggttcgactttcccattgttatcgtgaaggaaacaaagttgctgac
tggttggctcactatgcacaatctactgagctgggtcttcatgtgcttcgtgcccctcct
cctgattgtgtcaaattcgtaaaaaatgatatttctggagtttttaaactccgtgctgta
cgtgccggttctcgtgctgatttgaaagtgtga
DBGET
integrated database retrieval system
