Abrus precatorius (Indian licorice): 113856549
Help
Entry
113856549 CDS
T07330
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113856549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113856549
03012 Translation factors [BR:
aprc03012
]
113856549
Enzymes [BR:
aprc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113856549
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113856549
Translation factors [BR:
aprc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113856549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
nSTAND3
T2SSE
AAA_19
AAA_16
ATPase
Dicer_dimer
AAA_30
PhoH
ABC_tran
Motif
Other DBs
NCBI-GeneID:
113856549
NCBI-ProteinID:
XP_027344205
UniProt:
A0A8B8KK65
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MPTPYSGIFQGSIRFRALSRFNCTSVRPSLPSIFTTPLYRTSIRPRFTSFSASLRLHSNG
TLKQRPVTLPFWHQHSSSYGRFAYQDPSSDDSDAEFGPSPSHPHYQQLGESTLENIDEWR
WKLTMLLRNKDEQEVVSREKKDRRDFEQLSTLATRMGLYSRQYSRVVVFSKAPLPNYRPD
LDDKRPQREVMLPFGVHKEVDTYLLAHLSQKATNRLGSLDDSLHRSIDARSIPADEGIYE
QTEPTTQNSVVKEKILLRRSLQLRHQQQDWQESPEGQKMLEFRRRLPAFKEKDAFLRVIS
ENQVVVVSGETGCGKTTQLPQYILESEIEAARGAVCNIICTQPRRISAMSVSERVAAERG
EKLGESVGYKVRLEGLKGRDTRLLFCTTGVLLRRLLVDRKLKGVTHVIVDEIHERGMNED
FLLIVLKELLPRRPDLRLILMSATLNAELFSSYFDGAPTMHILGFTFPVRAYFLENILER
TGYRLTPYNQIDDYGQEKTWKMQKQAQAFKKRKSQIASAVEDALEVADFKGYSPRTQDSL
SCWCPDSVGFNLIEHVLCHIVKNERPGAVLVFMTGWDDINSLKDKLQGHPLLGDPSRVLL
LACHGSMASSEQRLIFENPEGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALN
NTPCLLPSWISKAAARQRRGRAGRVQPGECYHLYPRCVYDAFADYQLPELLRTPLQSLCL
QIKSLQLGSISEFLSKALQPPEPLSVQNAVEYLKIIGALDENENLTVLGHKLSMLPVEPK
LGKMLILGAILNCLDPIMTVVAGLSVRDPFVMPSDKKDLAESAKARFAARDYSDHLALVR
AYEGWKDAEAQQAGYEYCWRNFLSSQTLKAIDSLRKQFFYLLKDIGLVNNNSETYNTWSH
EEHLLRAVICAGLFPGISSVMNKDKSIALKTMEDGQVLLYASSVNAGVPQIPYPWLVFNE
KVKVNSVFLRDSTGISDSVLLLFGGNVSRGGLDGHLKMLGGYLEFFMKPELAKTCLSLKR
ELEELIQRKLLDPMLDTQSHNELLSAVRLLVSEDQCDGRFVFGRQVVPKIKKETNSKSSG
GVGSDNSKNQLQTFLNRAGHESPTYKTKQLKNNQFRSTVIFNGLNFVGQPCNSKKLAEKA
AAAEALLWLKGDTHSSDDINHASVLLKKSSKKSRKNSFSGAKWS
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgcctacgccatattcaggcatattccaaggctccatcagattcagagccctgtcgcgg
ttcaactgcacttctgtcagaccttctcttccctccattttcaccactcctctttaccgc
acttccattcgccctcgctttacgtccttctctgcctcgcttcgcctccattcaaacggc
acgcttaaacagaggcccgttactttgccgttttggcaccaacacagctccagttatggt
cgttttgcctatcaggacccgtccagtgacgattccgatgccgaattcggcccttctccc
tctcatcctcattatcaacaattgggggagtcaacacttgaaaacattgatgagtggaga
tggaagctgactatgcttcttcgcaacaaagacgaacaagaagttgtgtccagagagaaa
aaagaccgtcgcgattttgagcaactttcaactttagctactaggatgggtttgtatagc
cggcagtattcaagagttgttgtgtttagcaaggcacctttgccaaattaccgccctgat
ctcgatgataagcgtccacaaagagaggtaatgttaccatttggtgttcataaagaagta
gacacttatctccttgcccacctttcacaaaaggctacaaacaggttgggttctttggat
gattccttacatagatcaattgatgctagaagcattcctgccgatgaaggaatttatgag
cagactgagcccacaacccaaaatagtgttgtcaaggagaaaatccttctacgaagaagt
ttgcaactgcgtcatcagcaacaggattggcaggagtctcctgaagggcaaaagatgctg
gaatttcgtagaaggcttcctgcattcaaagagaaggatgcatttttgagagtcatttca
gagaatcaggtcgttgttgtctcaggtgaaactggttgtggtaagaccacacaacttcct
caatacatattagaatctgagattgaagctgcacgtggagctgtatgtaacataatttgt
actcagcccagaaggatatctgctatgtctgtttctgaaagagttgcggcagagcgtggg
gagaaattgggagaatctgttggttacaaagttcgtttggagggtttgaaagggagagat
actcgtcttcttttttgcaccacaggtgtattattacggagattgcttgttgataggaaa
ttaaaaggtgtaactcatgttattgttgatgaaattcatgaacgtggaatgaatgaagat
tttcttctcattgtcctgaaggaacttctccctcgtcgtcctgatttgaggttgattttg
atgagtgcaaccttaaatgctgagcttttttcttcatactttgatggtgctccaactatg
catattctgggttttacatttccagttcgagcatattttcttgagaatattttggaaagg
actggatatcggttgacaccttataatcagattgacgactatggtcaagaaaaaacatgg
aaaatgcagaaacaagctcaagctttcaaaaaaagaaagagccagattgcttctgctgtt
gaggatgctttagaagttgcagattttaagggttatagtccacgcactcaagattcattg
tcctgctggtgccctgactcagttggttttaaccttattgaacacgtgctttgtcacatt
gttaagaatgaaaggccaggtgccgttttggtttttatgactggttgggatgatataaac
tctttgaaggataaactccaaggtcatcctttgttgggggatccgagccgagtattgctt
cttgcatgccatggctccatggccagctctgagcagaggttgatatttgaaaatcctgaa
ggaggggtgaggaaaattgttttggcaacgaacatggctgagactagcattaccatcaat
gatgttgtctttgtggttgactgtggaaaagcaaaagaaacatcatatgatgcattaaac
aacactccttgtttgcttccatcttggatctcaaaagctgctgcccggcagagaagagga
agggctggtcgtgttcagcctggtgaatgctaccatctttatcccagatgtgtatatgat
gcttttgctgactatcaattgccagagctcttaagaacaccgttgcagtccttatgtcta
caaatcaaaagtctacaacttggaagcatctctgagtttttatctaaagctctgcagcca
ccagagcctctatcggttcaaaatgctgttgaatatttgaagattattggagcattagat
gagaacgaaaatttaacagttttagggcacaaattgtcaatgcttcctgtagagcccaaa
cttggcaaaatgctcattttgggagctatcttaaactgtttggatcctataatgactgtt
gttgctggtcttagtgtaagagatccatttgtgatgccatctgacaagaaggatcttgct
gagtctgccaaggcccgatttgctgctcgtgactatagtgatcatcttgcacttgtccgg
gcttatgagggttggaaagatgctgaagcacaacaagctggttatgagtactgttggcga
aattttctttcttctcaaacacttaaggccattgactctcttcgaaagcaattcttttac
ttgctcaaagatattggtctggtcaataacaattctgaaacttacaatacttggagtcat
gaagagcatcttctccgtgctgtcatctgtgcgggtttgtttcctggaatatcctctgtc
atgaacaaagacaagtccatagcactgaaaacaatggaggatggccaggttcttctatat
gctagctctgtaaatgctggtgtaccccaaattccatacccatggttagtgtttaatgaa
aaggtgaaagtaaattcagtattccttagggattcaactggcatatctgattcagtgctg
ctcttatttggtgggaatgtatcccgaggtggactagatggtcacctgaaaatgttggga
ggctatttggagttttttatgaaaccagaattagccaagacttgcttaagcttaaagagg
gaactggaagaactgatacagagaaaacttctggatcccatgttggatactcaatcgcat
aatgagcttctttcagcagttagattgttggtatcagaggatcagtgtgatggtagattt
gtctttggtcgccaggtcgtaccaaaaataaagaaggaaacaaattccaaaagtagcggt
ggagttgggagtgataattctaaaaatcagcttcaaacattccttaacagggctggacat
gaatcaccaacttacaaaacaaagcagctgaaaaacaatcaattccgttctactgtcata
ttcaatggcttgaattttgttggtcagccatgcaacagcaaaaaattagcagaaaaagct
gctgctgctgaggctcttctatggttaaaaggggatacccattcctctgatgatatcaac
catgcatctgtgcttttgaaaaagagcagcaagaaaagtaggaaaaattcatttagtggt
gctaaatggagttga
DBGET
integrated database retrieval system
