Abrus precatorius (Indian licorice): 113857380
Help
Entry
113857380 CDS
T07330
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03015
mRNA surveillance pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113857380
09123 Folding, sorting and degradation
03018 RNA degradation
113857380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113857380
03041 Spliceosome [BR:
aprc03041
]
113857380
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113857380
mRNA cycle factors
Stress granule specific factors
113857380
Spliceosome [BR:
aprc03041
]
Complex C
Other components
Complex C specific factors
113857380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_5
RRM_3
RRM_7
RRM_Nup35
RRM_RdRP1_2
RRM_MARF1
GH97_C
PABC_AtC3H46
DUF5062
Motif
Other DBs
NCBI-GeneID:
113857380
NCBI-ProteinID:
XP_027344991
UniProt:
A0A8B8KMF4
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MAQVQVQPQNAMQGANGGAAPPAAGAAAAAAGGGGNQFVTTSLYVGDLDPNVTDSQLYDL
FNQLGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAARALDVLNFTPLNNKPIRIMYSHRD
PSIRKSGAGNIFIKNLDRAIDHKALHDTFSTFGNILSCKVATDSSGQSKGYGFVQFDNEE
SAQKAIEKLNGMLLNDKQVYVGPFLRKQDRESALDKAKFNNVFVKNLSESTTDDELKNIF
GEFGTITSAVVMRDGDGKSKCFGFVNFENTDDAARAVEALNAKKFDDKEWYVGKAQKKSE
REHELKLRFEQSMKETADKYQGANLYIKNLDDSISDDKLKELFSPFGTITSCKVMRDPNG
ISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVTLAQRKEDRRARLQAQFAQMRPVAM
PPSVAPRVPMYPPGGPGMGQQIFYGQGPPAIIPSQPGFGYQQQLVPGMRPGGAPVPNFFM
PMVQQGQQGQRPGGRRAGAVQQSQQPVPLMPQQMLPRGRVYRYPPGRGIPDVPMPGVAGG
MFSVPYDVGGMPLRDASLSQQIPIGALASALANASPEQQRTMLGENLYPLVEQLEPDNAA
KVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDVLRNVAQQQQAGGTADQLASLSLNDNL
VS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggttcaggttcagcctcagaatgcgatgcagggtgccaacggtggtgctgct
cctcctgctgctggcgccgccgcggctgctgccggtggcggtggaaaccagttcgtgacg
acgtcgctttacgtgggagatcttgacccgaatgtcacggactcgcagctctatgacttg
ttcaaccaattgggccaggttgtgtccgttagggtttgcagggacttgaccagtcggaga
tcgctcggttacggttatgtcaactatagcaacccgcaagatgctgccagagcattggat
gttctgaacttcactcctctcaataacaagcccattcgtattatgtattctcatcgtgat
cccagtatccgtaaaagtggggcaggaaatatatttattaagaatttggacagggcaatt
gaccacaaggcattgcatgatacgttttcaacatttgggaatatcctttcttgcaaggta
gctaccgactcgtctgggcaatcaaaaggctatggctttgtgcaatttgataatgaggaa
tctgctcaaaaagccatagagaagctgaatggtatgcttttgaatgataaacaagtatat
gtgggacccttccttcgcaaacaagatagagaaagtgctttggacaaggcaaaatttaac
aatgtttttgttaagaatctgtcagaatcaactactgatgatgaattgaagaacattttt
ggtgaatttggaactattaccagtgctgtagtgatgagggatggggatgggaaatcaaag
tgttttggatttgtgaattttgagaatactgatgatgctgctagggctgttgaggctctt
aatgctaaaaaatttgatgataaggaatggtatgttggaaaagctcaaaagaaatctgaa
agggagcatgaattgaaacttcgctttgagcagagcatgaaagaaactgctgataaatat
caaggggcaaacttgtatatcaaaaatttagatgatagcattagtgatgataagcttaag
gagctgttctccccttttggtaccattacctcttgtaaggttatgagagaccccaatggc
ataagtcgtggatcaggatttgttgcattttcgactcctgaggaggcatccagagcactc
ttggagatgaatggcaaaatggttgtaagcaaacctctgtatgtgactctagcccaacgg
aaagaagatagaagagctagactgcaggctcagtttgctcaaatgcggcctgttgcaatg
cctccgtctgttgctcctcgtgtgccaatgtatcccccaggtggtccaggtatgggtcaa
caaatattttacggtcaaggccctcctgctatcattccttcccagcctggatttggttat
caacaacaacttgtccctggcatgaggccaggtggggcccctgtgccaaatttctttatg
ccaatggttcagcagggacaacagggacagcgtcctggtggaaggcgtgctggtgcagtc
cagcagtcccagcagcctgttccacttatgccacagcagatgcttcctagggggcgtgtc
taccgttatcctcctggtaggggtattcctgatgttcctatgcctggggttgctggtggt
atgttttctgttccatatgatgttggtgggatgccactgcgtgatgcatcactctcccag
caaattcctattggagctttggcttcagctctggctaatgcttctccagagcagcagagg
acgatgctgggtgagaatctctacccccttgtggagcagttggagccggataatgctgcc
aaagtgacaggcatgcttctggagatggaccagactgaagttctgcacttgcttgagtca
ccagaggccctgaaagcaaaggtggctgaggctatggacgtcctaaggaatgttgctcag
cagcagcaggctggtggtactgctgatcagctggcttcattatcacttaatgacaacctt
gtttcttaa
DBGET
integrated database retrieval system
