KEGG   Abrus precatorius (Indian licorice): 113857904
Entry
113857904         CDS       T07330                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
aprc  Abrus precatorius (Indian licorice)
Pathway
aprc03030  DNA replication
aprc03410  Base excision repair
aprc03420  Nucleotide excision repair
aprc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aprc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113857904
   03410 Base excision repair
    113857904
   03420 Nucleotide excision repair
    113857904
   03430 Mismatch repair
    113857904
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aprc03032]
    113857904
   03400 DNA repair and recombination proteins [BR:aprc03400]
    113857904
Enzymes [BR:aprc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     113857904
    6.5.1.6  DNA ligase (ATP or NAD+)
     113857904
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     113857904
DNA replication proteins [BR:aprc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    113857904
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     113857904
DNA repair and recombination proteins [BR:aprc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     113857904
   NER (nucleotide excision repair)
    Other NER factors
     113857904
   MMR (mismatch excision repair)
    Other MMR factors
     113857904
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase MC6
Other DBs
NCBI-GeneID: 113857904
NCBI-ProteinID: XP_027345986
UniProt: A0A8B8KQ45
LinkDB
Position
Unknown
AA seq 768 aa
MLPLHLRPCFSLPFFRPITVIRVSSLFSLSLCFTPHRAMSKPPSAFDALMSGARAAAKKK
SPQQPQPPSSSPKKRKSPHSTSTQNPNSLKTPLSSSPIETVQQPNKQHETAEPEHKIRHV
SSSQEIVAELKKRVPQLKKKPSEFDPASVACWEKEKPVPFLFLCLAFDMIAEETGRIVIT
DIVCNLLRTVIHATPEDLVPVVYLSANRIAPAHEGLELGIGDASIIKALAEACGRTESQI
KNQYKEKGDLGLVAKASRSSQSMMRKPDALTIRKVFNTFRLIAKESGKDSQEKKKNHIKA
LLVAATDCEPQYLIRLLQTKLRIGYAEQTLLAALGQAAVYTEEHSKPPPGIQSPLEEASK
IVKQVYSVLPDYDKIVSALLTDGLWMLPKTCNFTPGVPVGPMLSKATKGVSEVLNKFQDV
EFTCEYKYDGERAQIHYMENGSVEIYSRNAERNTGKFPDVVAAISRLKKTTVSSFVLDCE
LVAYDRAKQKILPFQVLSTRARKNVSMSDIKVDVCVFAFDLLYLNGQALLQENLKVRREH
LYASFAEESGFLQFATSITSNDVEEVQKFLDKAVDASCEGLIIKTLNEDATYEPSKRSLN
WLKLKKDYMENIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQRTGFSEEMLE
ERSTSLQSKVIPKPKAYYRYAETINPDVWFEASEVWEVKAADLTISPVHRAAVGIVDTDK
GISLRFPRLLRVRLDKAPEEASSSELVAEMYNAQKHNHTNNQDDNEDD
NT seq 2307 nt   +upstreamnt  +downstreamnt
atgctcccactgcatctacgaccatgcttctctcttcccttctttcgccccatcacagtt
attagggtttcctctctcttctctctttctctctgtttcacccctcaccgcgccatgtcc
aaaccaccctctgctttcgacgctctcatgtccggcgcacgcgccgccgccaagaaaaaa
tccccacaacaaccacaaccaccttcctcatcccctaagaaaagaaaatctccacactcc
acttctactcaaaaccctaacagcctcaaaacccccctttcttcttcccccattgaaacc
gttcaacaacctaacaaacagcatgaaaccgccgagccggaacacaagattcgccacgtg
tcatcttctcaggagattgtcgcggagctgaagaaacgagttccgcagctgaagaagaag
ccttcggagttcgatccagcttcggtggcttgctgggagaaggagaaacctgtgccgttt
ctcttcctctgcttggcctttgacatgattgctgaggaaacaggaaggattgttatcact
gacattgtttgcaatctgttgaggaccgtcatacatgccacgccggaggacctcgttccc
gtcgtttacctatccgccaatcgcattgctccggcgcatgaagggctggaattgggaatt
ggcgatgcctctattatcaaggcgctcgccgaggcgtgtggaaggactgagtcgcagatt
aagaatcagtataaggaaaagggtgatttagggttagtggccaaagcgagccgttcctct
cagtctatgatgcgtaagcctgatgcattgactattaggaaggttttcaacactttccgc
cttattgccaaggaatctggaaaagatagtcaagagaagaaaaagaatcatatcaaggca
cttcttgtggctgcaactgactgtgaacctcagtatctaatccgtttgctacagacaaag
ttgcgaattgggtatgctgagcaaactctcttagctgcattaggccaagctgcagtatac
actgaagaacactctaaaccacctcctggaattcagtctcccttagaagaggcttcaaaa
attgtcaaacaagtgtattctgttcttcctgactatgacaaaatagtatctgcactgctt
acggatggtctatggatgcttccaaagacatgtaattttactcctggtgttccagttgga
cctatgctgtcaaaagcaacaaaaggggtatctgaagttctaaataaattccaggatgtg
gagtttacctgtgaatacaaatatgatggagagcgtgcccagatacattacatggagaat
ggctcagttgagatttacagcagaaatgcagaacgaaacacagggaagtttcctgatgtt
gttgctgcaatttcaaggttaaagaaaacaactgtatcatcatttgttcttgattgtgaa
cttgttgcgtatgatcgggcaaaacagaagatccttcctttccaggtgcttagcactcgg
gctcggaaaaatgtatctatgagtgatataaaggttgatgtttgcgtatttgcttttgat
ttgttgtatcttaatggccaagcacttcttcaggaaaacctgaaagtccgtagagagcat
ctctatgcctcttttgcggaagaatctggatttcttcagtttgcaacatcaataacatca
aatgatgtcgaggaagtacaaaaatttcttgacaaagctgttgatgcaagttgtgaggga
ttaattattaagacattaaatgaagatgctacatatgaaccttccaagaggtcactcaac
tggctaaaactgaagaaagattatatggaaaatataggggactcactagatttggtacct
attgctgctttccatggtcgtgggaaacgtacaggggtctatggtgccttcctccttgct
tgctatgacagcaataatgaagaatttcaaagaacgggattctctgaagaaatgctcgaa
gaacgttctactagtcttcaatctaaagtgattcccaagccaaaggcatactatcgatat
gcagaaacaatcaatcctgatgtctggtttgaagccagtgaggtgtgggaggtgaaagct
gcagacctgaccattagccctgttcaccgtgctgcagtgggcatagtagatacggacaag
ggcatatctcttcggtttccacgtctacttcgagttcggctggacaaagctcctgaagag
gcctcatcatctgagctggttgctgaaatgtacaatgctcaaaaacacaatcacacaaac
aaccaagatgacaatgaagatgattga

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