Abrus precatorius (Indian licorice): 113859160
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Entry
113859160 CDS
T07330
Name
(RefSeq) exosome complex exonuclease RRP44 homolog A isoform X1
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113859160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113859160
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
113859160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
OB_HELZ2
CSD2
OB_RNB
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
113859160
NCBI-ProteinID:
XP_027347778
UniProt:
A0A8B8KWQ5
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MLHNKSFVKKTKAGKVMKQVREHYLRDDIYCGAPFCTVCDSSGARLGASASTILVVDTNV
VLNQIDLLENPAIEDVVVLSIVLEEVKNKNMAVYNRIRAICNNSMRKFFVFSNEYHRDTY
VKEMSGETKNDRNDRAIRVATQWYQNHLGSAVKVLLITNDKENKRKACEEGIVAETVESY
VKSLDRSDLLDLLVRPASEDVDMEVVEDLRPSKRKVIYSEHKPMSEITSGLHRGIYHQGK
LRVNRYNPFEAYVGSESIGDEIIIYGRSNMNRAFDGDIVAVELLPQDQWQEASSLSIAGE
EDEDEDEDVHLAPNSADDAPRTMPQQGSSGEVNAVSSRPSGCIVGIIKRNWNSYCGSLEP
MPMPAGSGGVAHALFVSKDRRIPKIRIQTRQLNNLLDKRIIVAVDSWDRQSRYPSGHYVR
TIGEIGDRDTESEVVLIENDINSRPFSSQVLACLPPLPWSVSSKDLSNPIRQDLRHLCVF
SVDPPGCKDIDDALHCHALPNGNFEVGVHIADVTNFVHSGTPLDDEAAQRGTSVYLVERR
IDMLPKPLTEDICSLRSDVERLAFSVIWEMTPEADIISSRYTKSIIKSSAALSYVEAQAR
MDDSRLMDPLTTDLRNMNSLAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI
REANQMVEEFMLAANVSVAQQILKTFPLCSLLRRHPTPTREMLEPLLRTAAAIGINLDVS
SSKALADSLDHAVGDDPYFNKLIRILATRCMSQAVYFCSGDLSPPEYYHYGLAAPLYTHF
TSPIRRYADVIVHRLLAASLGISKLPSVFQDRLQLTSIADNLNYRHRNAQMAGRASVELH
TLIYFRKRPTETEARIVKIRSNGFFVFVPKYGIEGPVYLTARAEKGSGEWYVDEQQQKIK
KMDGSLSYSILQTVKIHMEVVEPQPNRPKLQLTLM
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgctccacaacaagtccttcgtcaaaaaaaccaaagctggcaaagtcatgaagcaagtg
cgggaacactacttgcgagatgatatatactgtggcgcaccgttttgcaccgtttgcgat
tcttctggtgctcgcctcggtgcttctgcttccaccattctcgttgtcgacaccaatgtc
gttctcaaccagattgatttgctggagaatccggccattgaagatgtcgtggtgttgtcc
atcgtgctggaagaggttaagaataagaacatggctgtatacaaccgaataagagctatc
tgtaacaattccatgaggaaattctttgttttttccaatgaatatcacagggatacatat
gttaaggaaatgagcggggaaactaaaaatgataggaatgatagagctattcgagtggct
actcagtggtatcagaatcatcttggtagtgcagtgaaggttttgcttataactaatgat
aaagagaacaagaggaaggcttgtgaggagggcattgttgcagaaacagttgagtcatat
gtgaagtctttggaccgatctgatttacttgacctgcttgtgcggcctgcatctgaggat
gtggacatggaagtggttgaagatcttagaccatccaagaggaaagtcatctattcagag
cacaagccgatgtcagaaattacgtctggtttgcatcgtggaatatatcatcaagggaaa
cttcgtgtaaaccgttacaatccatttgaagcatatgttgggagtgagagcattggtgat
gaaataattatttatgggcgctcaaacatgaaccgagcttttgatggtgatattgtggca
gttgaacttctgcctcaggaccagtggcaagaagcctcgtctctatctatagccggtgaa
gaagatgaggatgaggatgaagatgttcatctagctccaaatagtgctgatgatgcaccc
agaactatgcctcagcagggttcttctggagaagtaaatgctgtgtccagtcgcccttct
ggttgtattgttggtattataaagagaaactggaattcgtattgtggatctttggagcca
atgcctatgccggctggtagtggtggtgttgcccatgccttgtttgtctccaaagatcgc
agaattcccaagattcgaatccaaacccgtcaactcaataaccttttggacaagagaatt
attgtggcagttgattcttgggatcgtcaatctcgatatccatcaggtcattatgtgcga
actataggagagataggtgatagagatactgaaagtgaggtggttttgatagaaaatgat
ataaattcacggccattctcttcccaagtgctggcttgcttgccaccattgccatggtct
gtctcttctaaagatttgtctaatccaattaggcaggatctgcgtcatctatgtgtcttc
agcgttgaccctccaggctgcaaggatattgatgatgcactccactgtcatgctctacca
aatggaaactttgaagttggagttcatattgctgatgtgacgaattttgttcattctggc
actccccttgatgacgaggctgcgcaaaggggtacgtctgtctaccttgttgagcggcgg
atagacatgcttcccaaacctcttacggaggatatatgttctcttcgttctgatgtggaa
aggctagcattctctgtcatatgggaaatgacacctgaagcagacattatttccagcaga
tacacaaaaagtatcataaaatcttctgcagcattgtcttatgttgaagcacaagcgaga
atggatgatagtcgattgatggatccactaactacagatttgagaaatatgaatagttta
gctaagaaaatgagattaaggcgtattgagagaggagctttgactcttgcatctgctgaa
gttaaatttcaaattgacacagagactcatgatccacttgatattggcatgtaccagatt
cgggaggccaatcaaatggtagaggaatttatgcttgcagctaatgtatctgttgcacaa
caaattctgaaaacttttccattgtgctcattattaaggcgtcatccaacgcctactaga
gagatgcttgaacccttgctacgaactgctgctgcaattggcataaacttggatgtctca
tcatcaaaagcattggctgattctcttgaccatgctgtgggtgatgatccttacttcaat
aagttgatccgcatactggctactaggtgcatgagtcaggcagtttatttctgtagtggg
gatcttagccctccagaatattatcattatgggcttgcagctcctttgtatactcatttc
acatcacctattagaagatatgcagatgtcattgtgcacaggctacttgctgcttcttta
ggaatatccaagttaccctctgtatttcaagacagactccagctcactagtattgcagac
aatttaaattatcggcacagaaatgctcaaatggccgggcgggcctccgtagagctacat
acactaatttatttcaggaagaggccaacagagacagaggctaggatagtgaaaatacga
tctaatggattttttgtgtttgttcccaaatatggtatagaaggacctgtatatttgaca
gcaagagctgaaaagggaagtggagaatggtatgtagatgagcaacagcagaagattaaa
aagatggatggtagcctctcatacagcattttgcagacagtcaaaattcacatggaggtt
gtggaaccccagcctaaccggccaaaacttcagctgaccctcatgtaa
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