KEGG   Abrus precatorius (Indian licorice): 113860930
Entry
113860930         CDS       T07330                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
aprc  Abrus precatorius (Indian licorice)
Pathway
aprc03018  RNA degradation
aprc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aprc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113860930
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113860930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aprc03019]
    113860930
   03041 Spliceosome [BR:aprc03041]
    113860930
Messenger RNA biogenesis [BR:aprc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113860930
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     113860930
Spliceosome [BR:aprc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    113860930
 Complex C
  U2 snRNP components
    113860930
SSDB
Motif
Pfam: LSM SM-ATX DUF150_C DUF1256
Other DBs
NCBI-GeneID: 113860930
NCBI-ProteinID: XP_027349296
UniProt: A0A8B8KZ84
LinkDB
Position
Unknown
AA seq 93 aa
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPEGVDIELLHDATRREARGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttgttcttctcctacttcaaggatttggtgggcagagaagtaaccgtggagctcaag
aacgatttagccatccgagggacactgcattctgttgaccagtatctcaacatcaagctc
gaaaacactcgcgttgtcgatcaagacaagtaccctcacatgctttctgtaaggaactgc
ttcatcagagggtcggtagttagatacgtgcaattgcctcctgaaggggtggacattgaa
ctattgcatgatgccacaaggagagaagctcggggtggttag

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