Abrus precatorius (Indian licorice): 113862004
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Entry
113862004 CDS
T07330
Name
(RefSeq) protein RRP6-like 2 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113862004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113862004
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
113862004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
Motif
Other DBs
NCBI-GeneID:
113862004
NCBI-ProteinID:
XP_027350953
UniProt:
A0A8B8L6D0
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MEFDHYLSELSASSPCIPSGEDFHFYYKFGEFRRPIEEIARRTHSMLDTIGAAEHIWGRG
TTFPSDIDDAYEWLVNANEDVLELVEELVDELRKVAKVEEEDCENGFGSGCVKRRKEFID
PVNRVDSEMLGAKPKVPFHIPTITKPQYAHNIVVNNASQPFQHVGLEKSDDGQRFIHPLE
KLSFLDFVDKVNLENLEPVKPSTIECTPFKLVEDVKGLKELAAKLSSVNEFAVDLEHNQY
RSFQGLTCLMQISTRTEDFVIDTLKLHVHVGPYLREVFKDPTKKKVMHGADRDIIWLQRD
FGIYVCNLFDTGQASRVLKLGRYSLQYLLLHFCGVAANKEYQNADWRIRPLPDVMLRYGR
EDTHYLLYIYDLVRIKLFTLSKESEGSDNPLVEVYKRSYDICMQLYEKELLTENSYLQIY
GLRGAGFNAQQLAVVSGLFEWRDILARAEDESPGYVLPNKIILEIAKQMPVITSNLRRLV
GKSKLPYVERSLDIIVNIVRRSMQNGAAFEEAALRLKEEHAASIISSHSILGNSEKSKHA
VEIPSVAYETSDPQKPVSGLVSTSTPVGTVTVDTESDLEDMVQSNLERSNYRQGENSVVS
SVHQRKRG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgatcattacctctcggagctttccgcttcctcgccatgcattccctccggc
gaggacttccatttctattacaaattcggcgaattccgacgcccgatcgaagaaatcgcg
aggaggacgcactcgatgctcgacacaatcggcgctgccgagcatatatggggcagaggc
acgacatttcccagtgacatcgatgacgcgtacgaatggctcgtgaatgcgaacgaagac
gttttggagctggttgaggagttggtggatgagttgcggaaggttgcgaaggtggaggaa
gaggattgtgaaaacgggttcgggtcgggttgtgtgaagaggagaaaggagttcattgac
ccggtgaatagagttgatagcgagatgttgggggcgaagcctaaggtaccgtttcatata
ccaacgattacgaagccgcagtatgcacacaacattgtggttaataatgcaagccagcct
tttcagcatgttgggttggagaagagtgatgatggtcagaggtttattcatccactggag
aaactctcttttttggattttgttgataaagtaaatcttgagaatcttgagccagtaaag
ccttccacaatagagtgcacccctttcaagcttgtggaggatgtcaaaggactgaaggag
ttggctgctaagctgtcttctgttaatgaatttgctgtggatttggaacataatcaatat
cggtctttccaaggtttgacatgcttgatgcaaatttcaaccaggactgaagattttgta
atagatactctgaaactccatgttcatgttgggccgtacctgagggaagtcttcaaggat
cctaccaagaagaaggtcatgcatggagcagatcgagacattatatggcttcagcgggat
tttggcatttatgtttgtaatttgtttgatactggccaggcctcaagagtgttaaaattg
gggagatatagtctgcaatatcttttgctgcacttttgtggtgttgcggcaaacaaggaa
taccaaaatgcagattggagaatccgccctcttcctgatgtgatgctaagatatggccgt
gaagatacacactatctgctttatatatatgatttagtgaggatcaaattatttacattg
tctaaggaatctgaaggttctgataatcctctagtggaggtttacaagcgcagttatgat
atatgcatgcaactatatgagaaagagcttctgacagaaaactcataccttcaaatatat
gggttgcgaggggctggtttcaatgctcagcagcttgctgttgtttcagggctttttgaa
tggcgtgacattcttgctcgtgcagaggacgaaagtcctggctatgtattgccaaataaa
attattcttgagattgctaagcagatgccagtcattacaagcaatctacggcgattggtg
gggaagtcaaagctcccatatgttgagcgcagccttgatatcattgtcaacattgtcaga
cgttctatgcaaaatggtgctgcctttgaagaagctgcactacgtttgaaagaagaacat
gcggcaagtattatatcttcccattccattttgggcaacagtgagaagtcaaaacatgct
gtagaaattccaagtgtagcatatgaaacatcagatccacagaaacctgtttcaggttta
gtttccacctccaccccagttgggactgtaacggtagataccgaatctgatttggaggac
atggtacagagtaacctagaaagatccaactatcgccaaggggaaaattctgttgtgtcc
agtgtccaccagcggaaaagagggtga
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